Cyprinus carpio (common carp): 109087149
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Entry
109087149 CDS
T05134
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04020
Calcium signaling pathway
ccar04260
Cardiac muscle contraction
ccar04261
Adrenergic signaling in cardiomyocytes
ccar04270
Vascular smooth muscle contraction
ccar04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109087149
04020 Calcium signaling pathway
109087149
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109087149
09153 Circulatory system
04260 Cardiac muscle contraction
109087149
04261 Adrenergic signaling in cardiomyocytes
109087149
04270 Vascular smooth muscle contraction
109087149
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109087149
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109087149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
109087149
NCBI-ProteinID:
XP_042618966
UniProt:
A0A9R0B3R6
LinkDB
All DBs
Position
A8:11418220..11440750
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AA seq
1743 aa
AA seq
DB search
MPGEGKPTGGLDVSKLSEPQSLTDPSDWFQECPMGNDCNWFFELPVGLLCQSGHFWILLL
VLNLVLGVLMRAGPTQAITCVVENSLRRESKAKARGDFQKLREKQQMQEDLCGYMDWITQ
AEDIDEFDEGMGTDGEIRGWFSHSNETHASLPASETASVNTENIDEEHTDCCAACCARIM
KIPCCRALRRWNRCIRRNCRTAVKSVTFYWLVLILVFLNTALSASEHYNQPDWLTDVQDI
ANKVLLSLFTVEMLLKMYSLGLQGYFVAFFNRFDCFVVCGGILETVLVEMEIMPPLGISV
LRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASLLLLLFLFLIIFALLGMQLFGGKFN
FDETQTKRSTFDSFPQALLTCFQILTGEDWNVVMYDGIMAYGGPVFPGMIVCLYFVILFI
CGNYILLNVFLAIAVDNLAGGDGDNKKIEEKKEGQGEGEIENKEVKVDIDDEYEEEEEPK
EGDDGEEGITQLNVADFAPPKEKVLPIPEGSAFFCLSKTNKIRVGCHTVIHHHIFTNLIL
VFIILSSISLAAEDPIRAHSFRNNVLGYADYAFTSIFTVEILLKMTVHGAFLHQGSFCRN
WFNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIR
TIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKNTPEQCKGTFVVYKDGDVSHPMVR
ERIWINSEFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANAENHGPIYNYRVEISIFFI
VYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELDKNQRQCVEYALKAQPLKLYIPKNP
VQYKFWSIINSTGFEYIMFVLILLNTVTLAVQHYDQSKFFSYVMDILNMVFTGLFTVEMI
IKLMALRLRHYFVDAWNSFDALIVVGSVVDIVVTEFSSSEDSSRVSITFFRLFRVMRLVK
LLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYAVIGMQTFGKIAMHDHTQINRNNN
FQTFLQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDCEPGEEFSCGSNIAIVYFISFF
MLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVAL
LRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTALKIKTEGNPDQ
ENEELRIIIKKIWKRTKPKILDEVIPPPTEEEVTVGKFYATFLIQDYFRKFRKRKEIVGL
GESENGNPLALQAGLRTLQDLGPEMRLAMNEDLEEEEEGLEEEQDEDDPCYKNENGYAGH
TEPSSKSRRSSLATTPSGAPVPVSGDGILNGGLGRRSSLAKTPNGNGTLEHENFRRRDSM
RSSSHYQHKNGVIDQLPRRPSYYKYPRRDSRDRFSSPLSRREEDGEYPGEQRFYGKDEDS
ESVISRERHGYPEDSTMFPGHRDMYDGHSMRHPVYGNHYGNSYGEGRRTARRRLLPATPT
ARKASFNIQCLRRQGSSDDLPIPGTYHQNSPPCRVRSQGYGSYDSRQSSARSSTGSTASW
ANTSPRRGHLLYAPLILVEEEGAGEASVGIWDKKASAVGVPASVRHPGMGWYSGPSTGGG
GQPYRAYTTLRVPTQLSPQYSEKRGSADSLVEAVLISEGLGLYAKDPKFVAFAKREIADA
CHMTIDEMESAASDLLSRGGPGESQGFLNHTDMCSSAIYSDEEPIRSHEEEELADEMTCV
TSF
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcgagggaaaacctactggaggtctggatgtgtcaaagctctccgagcctcag
agtcttacggacccctcagactggtttcaggagtgcccaatggggaatgattgcaattgg
ttttttgagctgcccgtgggtttactttgtcagtctggtcatttttggatccttctgctt
gttctcaaccttgtgttgggggtgttgatgcgggctggtcctacacaggccattacttgt
gtggtagagaattctctaaggagagagagcaaggcgaaagctcgcggagatttccagaag
cttcgtgagaaacagcagatgcaggaggatctgtgtggatatatggactggatcactcag
gctgaggacattgatgagtttgatgaggggatgggaacagacggggaaattcggggctgg
ttcagccactcaaacgaaacccatgcaagtcttccagccagtgaaacagcttccgtgaac
actgaaaacatagatgaggagcacacagattgttgtgctgcttgctgtgctcgcattatg
aagatcccgtgctgtcgtgccctgcgccgctggaaccgttgcatccgtagaaactgtcgt
acagcagtgaaatctgtgacattctattggttggtcctgatcctggtcttcctcaatacg
gctctcagtgcttcagaacattataaccaaccagactggctcacagatgttcaggatatt
gccaataaggttcttctctcgttgttcacggtggagatgttgttgaaaatgtacagtctg
gggttgcagggatattttgtggcatttttcaaccgttttgactgttttgtcgtgtgcggt
gggattctggagacagttcttgtggagatggagatcatgccacctctcggcatctcagtg
ttgcgctgcgtccgcctgcttcggatcttcaaagtcacacgccattggacggctttgtcc
aatctggtggcctcgctactgaattcaatgaagtccattgcctccctgctgctgttgctt
ttcctcttcctcatcatcttcgctttgcttggcatgcagttatttggagggaagttcaac
tttgatgagacacaaaccaagagaagtacctttgattccttccctcaggccctgctcacc
tgctttcagatattaacaggtgaagactggaatgtagtaatgtatgatggtatcatggca
tacggcggcccagttttccctggaatgatcgtctgtctttactttgtgattttgttcatt
tgtggtaattatatcctgctgaacgtcttcttggccattgctgtcgacaacttagcagga
ggggatggagacaataagaagattgaagaaaaaaaagagggacagggtgaaggtgaaata
gagaacaaagaggtgaaggtggacatagatgatgagtatgaggaagaggaggagcctaaa
gagggagatgatggagaagaagggataactcagctcaatgttgctgactttgctcctcct
aaagagaaagttctaccaatcccagagggcagtgcattcttctgcctcagcaagaccaac
aaaataagagtgggctgccataccgtgatccatcaccacatcttcactaatctcatcctg
gtcttcatcattctcagcagcatttctctggctgcagaggaccctatcagagctcactcc
ttcaggaataatgtgttgggttatgctgattatgcttttacttctatattcactgtggag
atcttactgaagatgaccgtgcatggcgctttcctccatcagggttccttctgtagaaac
tggtttaatttgttggatcttttggtggtcagtgtgtctctggtctccttcttcttacat
tcaagtgccatctctgtagtgaagatcctaagggtgctcagagttctgaggcctcttcga
gcgatcaacagagccaaaggactcaagcatgtggtacagtgtgtgtttgtggctataagg
accatcgggaacatcatgatcgtcaccactctactacagttcatgtttgcctgcatcggt
gttcagcttttcaaggggaaattttatcgttgcacagatgaagctaaaaacactccagaa
cagtgcaagggcacatttgtggtgtataaagatggagatgtgagtcatccaatggtgaga
gagaggatctggatcaacagtgaattcaacttcgataatgtactgatgggaatgatggcc
ctgtttacagtctccacttttgagggttggccagcgctgctctacaaagccattgatgcc
aatgcagagaatcacggccccatttacaactaccgtgtggagatctctatattcttcatc
gtctacatcatcatcatcgccttcttcatgatgaacatcttcgtgggttttgtcatcatc
acttttcgtgagcaaggagaggctgagttcaagaactgtgagctggacaaaaatcagaga
cagtgtgtggaatatgccctaaaggcccagccactgaagctgtacatccccaaaaaccca
gtgcagtacaagttctggtctataatcaactccacagggtttgagtacatcatgtttgtg
ctgattctcctcaacactgttactctggctgtgcagcactatgaccagtccaaatttttt
agctatgtgatggacatcctcaatatggttttcaccggccttttcactgtggagatgatt
attaaactgatggctctcagactcaggcattactttgtcgacgcatggaattcttttgat
gctctgattgtggtgggaagtgtggtggacattgtggttacagagttcagtagctcagag
gacagctctcgtgtgtccattactttcttccgcctgtttcgggtaatgcgactggtgaag
ttgctcagcaagggagagggcattcgtaccctgctctggacttttgtgaaatcactccag
gccctgccgtatgttgctcttctgatcgctatgatcttcttcatctatgctgtgattgga
atgcagacattcggaaagatcgccatgcatgaccacacacaaattaacaggaacaacaat
tttcagacttttcttcaggctgtactgcttcttttcaggtgtgcaacaggtgaagcatgg
caggagatcatgttggccagtcttccgggaaagcgctgtgacccagagtcagactgtgaa
cccggggaagaattctcctgcggcagcaacattgccattgtctactttatcagtttcttt
atgctctgcgccttcttgattattaatctgtttgttgctgtcattatggacaatttcgac
tatctgacccgtgattggtcaattctcgggccacatcacctggatgaatttaaaagaatc
tggtcagagtatgaccctgaagccaagggtcgtataaaacatttggatgtagtggctttg
ctcaggagaatccagccgccacttggatttggaaagctgtgtcctcaccgtgtggcttgc
aagaggctggttgccatgaatatgcccctgaacagtgatggtacggtgaccttcaatgcc
accctgtttgccctggtcagaactgctctgaaaattaaaactgaggggaaccctgatcaa
gagaacgaagagttgagaatcatcattaagaagatttggaagagaacaaaacccaaaatt
ttggatgaggttattcctccccctactgaggaggaagtgactgtgggtaaattctatgcc
acattcttgatccaggactatttcaggaagttccggaaaaggaaagagatagtgggtctg
ggagagtcagagaatggtaaccctttagctctacaggcggggctgagaactctgcaggac
ctggggccagaaatgagactggccatgaacgaagatctggaggaggaagaggagggcctg
gaggaggagcaagatgaagatgatccctgttataagaacgaaaatggctatgcaggccac
actgagccctcaagcaaaagccggcgctcctctttggccactactcccagcggtgctcct
gttcctgtctcaggagatggcatcctaaatgggggactgggacgtaggagctccttagca
aaaacaccaaatgggaacggcactctggagcacgagaactttagaagaagagacagcatg
cgttcctcctctcattaccaacacaagaatggtgtgattgaccagctgcccaggagacca
tcatactacaaatacccaaggagagactccagggacagattctcttctccgctatctcgg
agagaggaagatggtgagtaccctggagagcagcgcttctatggaaaagatgaggacagt
gagagtgtcatctccagagaaaggcacggttatccagaggacagcacaatgttcccggga
catagagacatgtatgatggacactctatgaggcaccctgtctatggtaatcattatgga
aacagttatggtgaaggcaggaggacagcacggagacgcctgctgccagcaacacctact
gcgagaaaggcttcatttaacatacagtgtttaagaaggcaaggtagcagcgatgatctg
cccatcccaggaacgtaccatcagaactccccaccctgcagagtgcgttcacagggatac
gggagctacgattctcgtcaaagcagcgctagatcgtctacgggttcaacagcatcctgg
gcaaacaccagccctcgacggggtcatctcctctacgctccccttatcctggtagaggag
gagggagcaggagaggcatctgtgggcatctgggacaaaaaggccagtgccgtcggagtg
cctgcgtcggttcggcatcccggtatgggatggtactcgggaccctctacaggtggagga
gggcagccatatagagcttacactaccctcagagtccccacccaactcagtcctcaatac
agtgagaagagaggcagcgctgacagtctggtggaagcggtcttgatctctgagggtttg
gggttgtatgccaaggacccaaaatttgtagcctttgccaagcgtgagattgcagatgcc
tgtcacatgaccatagatgagatggaaagtgctgcaagtgatctcttgagtcgtgggggc
cctggggagagccaaggcttcctgaaccacacagacatgtgtagttcagccatatacagt
gatgaggagccgatcaggagccacgaggaagaggaactggctgacgagatgacttgtgtt
acatctttttga
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