Cyprinus carpio (common carp): 109091286
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Entry
109091286 CDS
T05134
Name
(RefSeq) low-density lipoprotein receptor-like isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03272
Virion - Hepatitis viruses
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
109091286
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109091286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109091286
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109091286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_3
SGL
Vgb_lyase
EGF_CA
hEGF
Motif
Other DBs
NCBI-GeneID:
109091286
NCBI-ProteinID:
XP_042613582
UniProt:
A0A9R0AW58
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Position
A6:5926787..5935755
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AA seq
828 aa
AA seq
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MVLLQVMNSRRSECGFVVETLTGSAAVCSQDQFRCASGKCITSRWVCDETDDCGDGSDEL
PQSCGQKTCLLGQFSCGGRLNQCVSTRWRCDGKTDCENGADEQGCVLKNCTDEEFRCRSG
QCVSLAFVCDSESDCEDGSDEGSCPVPTCSPGSFQCNNSVCVPRLWACDGDADCADGSDE
WPQNCPGVTGQKPQTVCRDHEFLCASGECVHGSWRCDGTGDCADGSDEHNCTAPTCRPDE
FLCNDGSCVPGMRQCDGNPDCRDHSDETDCVTVKACAGPGRFQCRSGECISADRVCDGQR
DCSDWSDEPLKDCNTNECLTNNGGCSHTCSDLKMGYECVCPAGFHLINRTHCEDVDECAD
ADRCTQICINLPGSFRCDCKDGFELDHMTKDCKAVTGSGAFLLFSTRNEVRKMALGSRTY
TALIGQQKNVVALDVDVHNDRIFWSDLSLQKIYSAAAADPAHPSTVIDSGISRPEGLAVD
WIHGNIYWTDSKLQTISVATADGSKRKTLISEGLQKPRAIVVDPQNNFMFWTDWGEPARI
EKSGLNGADRTALVTQDIAWPNGITLDVLSGRLYWVDSKLHTLSSIGVNGDGRHTLIQDE
QKLGHPLALAVFEEKVFWADTHSNSIWSASRVTGRDFTALAEHLHGLEDIVLYHSLTQPS
GRDWCREGAGCEFLCLPAPQINTHSPKYTCACPDHMTLAADTRTCVSGVNSTVPSRTAPR
RSGSKPDHHTTQTGSRSGINEEHEPVSSPSQHPTVLYITLPIVAVCLLVVGSMLLWRHWR
QKNTNTIHFTNPVYQKKTDDTVHIFRSPSLDGYSHPSCQMISVDEDAA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgctgcaggtcatgaactcgcgcaggtctgaatgcggttttgtcgtggaaacg
ctgaccggaagtgcagccgtctgcagtcaggatcagttcaggtgtgcgagcgggaagtgc
atcaccagccgctgggtttgtgacgagacggacgactgcggcgacgggagcgacgagctg
ccacagtcctgcggccagaagacgtgtttgttgggtcagttcagctgcggcgggcgtctc
aatcagtgcgtgtccaccaggtggcgctgcgacgggaagactgactgcgagaatggcgca
gacgagcagggctgcgtcctgaagaactgcacggacgaggagttccgctgccgcagcggt
cagtgcgtgtcgctggcgttcgtgtgcgactctgaatctgactgtgaagacggcagcgac
gaggggtcctgtcctgtgcccacctgcagccccggatccttccagtgcaataactctgtg
tgtgtgccgcggctctgggcctgcgacggtgacgccgactgcgcagacggctctgacgag
tggccacagaactgcccaggcgtcacgggtcagaagccgcagacggtctgccgcgatcac
gagttcctgtgcgccagcggcgagtgtgtccacggcagctggaggtgcgacggaaccggc
gactgcgcagacggctcagacgagcacaactgcaccgcgcccacctgccggccggatgag
ttcctgtgtaacgacggcagctgtgtcccgggaatgcgtcagtgtgacgggaatcctgac
tgccgggatcacagcgatgagacggactgcgtcaccgtgaaggcgtgtgccgggccgggc
aggtttcagtgtcgcagcggcgagtgcatcagtgcagaccgcgtgtgtgacggtcagaga
gactgctccgactggtcagatgagcctctcaaagactgcaacactaacgagtgcctcacg
aacaacggcggctgttcccacacgtgcagcgacctgaagatgggatacgagtgtgtgtgt
ccggccggattccacctgatcaaccgcacacactgtgaagacgtggacgagtgtgcagac
gcagacagatgcactcagatctgcataaacctgccgggcagcttcaggtgtgactgtaaa
gacgggtttgagctggatcacatgaccaaagactgcaaagcggtaacagggtccggtgcg
ttcctgctcttcagcacgcggaacgaggtcaggaagatggcgctgggcagccggacgtac
acggcgctgatcggccagcagaagaacgtggtggcgctggacgtggatgttcacaacgac
aggatcttctggtctgacctgagcctgcagaagatctacagcgccgcggccgctgacccc
gcccaccccagcactgtgattgacagcgggatctcccgccccgagggtctggctgtggac
tggatccacggaaacatctactggacggacagcaagctacaaaccatctccgtggcgacg
gcagacggcagcaaacgcaagacgctcatcagcgagggcctgcagaagccgcgcgcgatc
gtcgtcgacccgcagaacaatttcatgttctggacagactggggcgagccggcgcggatc
gagaagagtgggctgaacggcgcggaccggacggctctcgtcacgcaggacatcgcctgg
cccaacggcatcacgctcgatgtgctgagcggccggctgtactgggtcgactcgaagctg
cacacgctgtccagcatcggcgtgaacggagacgggcggcacacgctgatccaggacgag
cagaagctggggcacccgctggcgctggccgtgttcgaggagaaggtcttctgggccgac
acgcacagtaacagcatctggagcgccagccgcgtgactggacgagacttcaccgctctg
gccgaacatctgcatggtcttgaagacatcgtgctttatcacagtctcacacagccttcc
ggaagggactggtgcagagaaggcgccggctgtgagttcctgtgtctgccggcgccgcag
attaacacgcattcgcccaaatacacctgcgcctgccctgatcacatgaccctggccgca
gacaccaggacgtgtgtgtcaggtgtgaacagcacggtgccgagcagaaccgcacccaga
cgctccggatcgaagcctgaccaccacaccacacagacgggctctcggagcggaattaat
gaagaacacgagccggtttccagcccttcccagcatcccacagtcctgtacatcaccctt
ccgatcgtcgccgtgtgtctgctggtggtcggcagcatgttgctatggagacactggcgg
cagaagaacaccaacaccatccacttcaccaacccagtgtaccagaagaagaccgacgac
acggtgcacatcttcaggagccccagtctggacggatactcgcatccctcgtgtcagatg
atcagtgtggatgaagacgcagcctga
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