Cyprinus carpio (common carp): 109095774
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Entry
109095774 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109095774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109095774
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109095774
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
109095774
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109095774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
AAA_16
Motif
Other DBs
NCBI-GeneID:
109095774
NCBI-ProteinID:
XP_042572668
UniProt:
A0A9Q9VWV4
LinkDB
All DBs
Position
A3:5034376..5044411
Genome browser
AA seq
1261 aa
AA seq
DB search
MTLIKQQHEMFVWKTIIWKDKLNQKKQEMRDLMARFGRLSTEMRKHIPEGQKRKPRKGWS
DTILHYKVSVIDKCKFVTKCNLPTDECVELAGRYTEPVIIQRSKEQNEKYYREHVRSAHA
SGLNTSSHLLSNDKNRSIRIDQLFSPDCDGNTPKTVILSGDSGRGKSFTLQKIMLDWGFG
KLYYKNFNVIFLLKCEELKCISEEMSLFELLSWSCSLTLDQILQILELTTPEKVLFLIDG
IDEYVSHPPSHSMLVLTNPSDRARPMEILRSVLKGNLLPDSFMFVTTRSLAADTVMNLLK
GPQRFTEIVGFSETGVQEYFQKFFQDEQLFRKTYERVKISQSLLTACSVPLLCWMVCFCL
KKHFTDDDHVMRELKTTTSIHLVHFVSTLLEHHDKSQSVLTMLRSLGQRAEEGVKKREKF
FVEKSVTATGLDPATNVFLYKDSLKRNNRQVPVFKFMHFSFQEFFTALYYVLLDKEESWG
KITDLLTSLKMKGIINRPSPERRSNPIPSVVIFLFGLLNEEASSSLFEMIKWTVPQIINL
KTNLQESLLTVRRQHGCELFALRCLYELQDEKLVRRALGDWVSMNLYNISLKSTDCWVLL
YCLQCCPHVRYLNLMYCDLTAEKLKILQPALCMCETMKLSVKHLSEVGDLIQILGKSKFL
KKMRVQESENSAESPRWSLDLSVTHGDVLLSLSSSEKNPSFPAVLNITLTCPQSEISSTD
WSLFLQRLSKTAKVVEDSSALDEHISLLLSSFHSVGLKTLNLKLVSLNKSWASGIIFLAQ
TCNSLQQLSVSVTGLLLEEGLMFLKKSLTEPHCTVIIEGRKCSKLTDQCKEQDWSHICNE
KVEIHFKTKGFEKAGRVSISESEPSGLNLQPLLVCQSCVHIGDSDQWVQVEPSVCKDEGG
SEFRISTPAGRFECSRTRMRWVCAGDVTLQYRAVDGCFLSEELERLQCERIGPVIDVTVT
SGKLEEAHLPHYACLAESDPSLTRSVKVLSVEDEGISLESVELTRFHAKLLQPSFSPKTV
LMKLGISVKVHCDLLIFMTQKNPIILHVYFFPSDSFFKEKIXTEEKQSHPIKCSRPETPL
RMMKQHSLEVPGASVQPEAIKLRGDIEPNFFQVKHPVVNDIKMSLSRVDDQKSFWTATVW
KELINMHPNRAETLFQTGQNQNTPQSAGNFDKVQFFXXKLCVLLLKVFENVNNIADNLLQ
KKIIHEELYSEITNPTSTSEASMRKICSIVRKGSDTVKEMFISILLEEDPNLLNHLPLPD
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatcaaacagcagcatgaaatgtttgtgtggaaaacaatcatttggaaagac
aaacttaatcagaaaaaacaagaaatgagagatttaatggccaggtttggcaggttgtcc
acagaaatgagaaagcacatccctgaaggacagaagcgaaagccacggaaaggttggagt
gacacaattcttcactataaagtatctgtcattgataaatgtaagtttgtgaccaagtgt
aatcttccaactgatgaatgtgtggagctggcaggccgttacactgaaccagtgatcatt
cagaggagcaaagagcagaatgagaaatactatcgtgagcatgtgaggtctgcacatgct
tctggattaaatacatcatctcatctgttatcaaatgacaagaatcgcagcatcagaata
gatcagctgttcagtcctgactgtgatggaaacacaccaaaaactgtgattctcagtgga
gattctggaagagggaaatcattcacactacagaagatcatgttggactggggatttgga
aaactttactacaaaaactttaatgtaattttcctattaaagtgtgaagagctgaagtgt
atttcagaggagatgagcttgtttgagcttttgagctggagttgcagtttgacattagat
cagatcttacagatactggagttaacaacaccagagaaagtcctcttcctcattgatgga
attgatgagtatgtatctcatccacccagtcattcgatgttagtactcacaaatccttcc
gatagagccagacctatggaaattcttaggagcgtgttaaagggaaacttgctgcctgac
tcattcatgtttgtcaccacaagatctctagctgctgatacagtgatgaatctcctcaag
ggtcctcagcgtttcactgagattgtgggcttctctgagacaggggtgcaggagtacttc
cagaagttctttcaggatgagcagctcttcaggaaaacatatgagagagtgaagataagt
caaagcctcctgactgcctgctctgtgcctttgctgtgttggatggtctgtttttgtctg
aagaaacactttacagatgatgatcatgtgatgagagaactaaagacaaccacctccatc
cacctcgtgcactttgtgtccactctactggagcatcatgacaagagtcagtctgtcctc
accatgctgaggagtctgggtcagcgggcagaggaaggggtgaagaagcgagagaagttt
tttgtagagaagagtgtgactgcgactggcttagatcctgctactaatgtgttcttgtat
aaagatagtttgaaaagaaataacagacaggtgccagtgttcaagtttatgcatttcagc
tttcaggagtttttcactgctctttattatgttttactggataaagaagagtcctggggg
aaaatcacagatttgttgacctccctgaaaatgaagggtataatcaataggccttctcca
gaaagaagatcaaatcccatcccttcagtcgtgatatttctctttggtctcttaaatgag
gaggcgagcagctcactctttgaaatgatcaagtggactgttcctcaaatcataaatcta
aagacaaacctgcaggaaagtcttcttacagtgagaagacagcatggatgtgaactgttc
gctctgcgctgtctgtatgagctccaggatgagaaacttgtgaggagagctttaggagac
tgggtatccatgaatctgtataacatttccctgaagagcacagactgttgggtgctgctg
tactgtcttcagtgctgtccacacgtcagatacttgaacctcatgtactgtgatttaaca
gctgagaaactcaagattcttcagccagcactctgtatgtgtgagactatgaagttgtca
gtaaagcacctgtcagaagttggagatttgatccagattcttggtaaatctaagttcttg
aaaaaaatgagggttcaggaaagtgagaacagtgctgaaagtcccagatggtcacttgac
ctgtcagtcactcatggagatgttctgttgtctttgagctcctcagagaagaatccatca
tttccagcagtcttaaacatcacacttacatgtccacaatcagagatatccagcactgac
tggtcactcttcttacagagactcagtaagacagcaaaagtagtggaagactcttcagct
cttgatgagcatatcagtttgctgctgtcttcatttcactctgtgggtttgaagacattg
aatctgaagctggtcagtctgaataagagctgggcttctgggattattttcctcgcccag
acctgcaacagtctacagcagctcagtgtcagtgtcactggattgcttttggaggaagga
ctcatgtttctgaagaaatcactgacagagccacactgcactgtgatcattgaagggagg
aagtgcagtaaactcactgaccagtgcaaagaacaggactggagtcacatctgtaatgag
aaagtggagattcacttcaaaaccaaaggttttgaaaaagctggaagagtgagcatctct
gagtctgaaccatctggactgaatcttcagccgctcttagtgtgtcagtcttgtgttcac
attggtgattctgatcagtgggttcaggtggagccgtcagtctgtaaagatgaaggaggg
tcagagttcaggatcagcactccggcgggtcgattcgagtgcagcaggaccagaatgcga
tgggtctgtgctggtgatgtcactctccagtaccgtgcagtggatggatgtttcctcagt
gaagagctggagaggcttcagtgtgagcgaattggtcctgtgattgatgtgacagtgacc
tcagggaaactggaggaggctcatctgcctcattatgcctgtttagcagagtcagacccc
tctctcacacgaagtgtaaaggtccttagtgttgaagatgagggaatatccttggaatca
gtagagttgactcgttttcatgctaaactactccaaccatctttttctcctaaaacagtg
cttatgaaactagggatatcagtgaaagtgcactgtgatctactgatcttcatgactcaa
aagaaccccatcattctccatgtgtattttttcccatcagattcattttttaaagaaaaa
atttaaactgaggaaaaacagagtcatccaatcaagtgttcaagacctgaaactccactg
cggatgatgaaacaacacagtcttgaggttcctggtgcttctgtccaacccgaagcaatc
aaattaagaggtgacatcgagccaaacttctttcaggtcaaacatcctgtggtcaatgac
atcaaaatgtctctaagtcgagtggatgatcagaaatcattttggactgcaacagtttgg
aaagaattaatcaacatgcatccaaacagggccgagactttgtttcaaactggacaaaac
caaaatacaccacaatcggctggtaactttgataaagttcaatttttttgatagaaattg
tgtgtgctcttattaaaagtgtttgagaatgtgaataacattgccgacaacttgctgcag
aagaaaatcattcatgaagaattatattctgaaatcacaaatccaacttcaaccagtgaa
gccagcatgaggaagatctgcagcatagtgcgtaaaggtagtgacactgtgaaagaaatg
ttcatctccattcttctggaagaagatcccaaccttttaaatcatctgcctttacctgac
tcttaa
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