Cyprinus carpio (common carp): 109096381
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Entry
109096381 CDS
T05134
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109096381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109096381
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
109096381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
109096381
NCBI-ProteinID:
XP_042620005
Ensembl:
ENSCCRG00000016620
UniProt:
A0A9R0B3A5
LinkDB
All DBs
Position
A9:21001852..21071313
Genome browser
AA seq
1439 aa
AA seq
DB search
METTSPTTTEKKECKGSGLDGSSFSDLPKKPSPTTASRAPHLFSTFHTPIPIDLRHHEGR
YHYEPHPLHPMHGPHGLAGSPVISDISLIRLSPHAAATGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPPDAVTHEHLKERSLFGLPPPPPGANPSEYYHLITSHRSPYGD
LLMQTGAAAAHLPDYMSPVDMSRFPSPRLTPMLSRKRALSISPVSDASIDLQTMIRTSPN
SLVAYINKSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRGLNAFGHTPP
LLHPSPSLSTRQTLVTAAALTNNNSADTNTESSQNAGGDPAVSSTVNPMIYKRSKVKTEA
DGPHPISPGSQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEYDTQDQLVHHINNDH
IHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKT
HLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLR
KHVKTVHGPEAHVTKKQRGDAPPKPHPSKGNGENEAHTKHARGRTDGSGEANSTTRGVED
CQHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAMYSGGSLGDLSALDD
TPVVDSTGSPGTSAGVGLQLRKIRGGLLNLENIKKEKLKTVREPCSWTNASPQVRNTKLP
PIPSIDSLLDTPNMGIQMPGPPTQRLGDLSSYEMTMLNQLQERRDSSTSTMSSAYTLSRR
SSGISPCYSSRRSSEASQFGVRNNNISSADSYDPISTDLSRRSSEASQCGGAGGLTSLLS
LTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSAHMHHSQSVVNSR
RCSDTGYGAPGMMPHEVPANLPRRASDPVRRTTIDPLSLPRVQRFNSISNMSLSRLPAID
RRTFNLQSNTWSDGSLHRHPFSQRPPSISENVLMENMATDGGDQQEDDLVLPDDMVQYLN
SQNGSSNQDPGISVNGGHVLDLHSNMTSQQQQQFYGQRRMGMSINNGHVQSVRSDPEQIA
DPQGMNKNNMPVQWNEVSSGSVDATARLPKQQQLRGNLTVVQQKQNFGSYQGFSTNQQIV
PMSQNLANLQQEYPQRVTQRMNSVLQYRQSVTNPCQNLSEQVNPQLGYRQDLNYNSSQRL
TCSGMGPPNGRAMQNQEMQNYRSNFSHTSNVNQQNYVPLTQTAVQNAGRGLIQPRPPSEP
KPLNKQHSGSGMIQQNGCSLSNVNSSEARPKRPGDFGQHSNGNGTMYYSGEIHMLDRSVD
YGPPMSPCTNQAPVASLSTMASPGVNQVTSTVDSTQILEHTQIDFDAILDDGDHSSLMSG
TLSPGLLQSLSQNSSRLTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacaagtcccaccaccacagaaaagaaggaatgcaaggggtcaggcctggat
ggcagcagtttctcagaccttcccaaaaagccttcaccaaccacagcatcccgagctcct
cacttattctcaaccttccacacgccgattccaatcgacctgcggcaccatgaggggagg
taccattacgagccacatcctctgcaccccatgcatggaccacatggattagctggcagt
ccagttatctccgatatctcgctcatccgactatcgcctcacgctgcagctactggagag
tcacccttcaacccacctcacccgtatgtcaacccacacatggagcactacctgcgatca
gtccacagcagtcccacgctctccatgatctccgcagcacgaggactgagccctcctgac
gcagtgacccacgaacacctgaaggagcggagcttgtttggcctgcctcctcccccacca
ggggccaacccttcagagtactatcacctcatcaccagtcaccgcagcccttatggagac
ctgctcatgcagacgggggccgcggctgctcatcttcctgactacatgagcccagtggac
atgtcccgtttccccagtcccagactgacgccgatgttgagcaggaagcgagcgctgtcc
atctctccagtctcggatgccagcatcgacctgcagaccatgatccgcacctcgcccaac
tctctggtggcctacatcaataaatcccgctccagctcggctgccagcagctcttacggc
cacctctccgtcggggccatcagtccctccttcacgttcccacatcctatcacgccggtc
gcataccaccagctactgtcccaacagagaggtctaaatgcgtttggacacactcccccc
ctcctacatccttctccttccctcagcaccaggcagacgctggtgacagcagctgctctg
accaacaacaacagcgcagacaccaacacagagtccagccagaatgctggtggagacccg
gctgtcagcagcacggtcaaccctatgatctacaagaggtcaaaggtgaagactgaagca
gatggaccccaccccatctcaccgggatctcaggatcacatggagttgcgagaggaactt
gataaagatgaatgcaagcaagagcctgaggctgtgtatgagaccaactgccactgggaa
ggatgttccaaagagtacgacacccaggaccagctagtccatcatatcaataatgaccac
atccatggggagaagaaagagtttgtgtgtcgatgggaggagtgctcacgtgagcagaag
ccattcaaggcccagtacatgcttgtggtccacatgcgccgacacactggggagaagccc
cataagtgcacatttgaaggttgctcgaaggcttactctcgactggaaaacctcaaaact
cacttgaggtcccacacgggggaaaaaccttatgtatgtgagcatgagggttgtaacaag
gcgttttccaatgcttcagaccgagccaagcaccagaaccgcacgcactcgaatgagaaa
ccatatgtgtgtaagatcccaggttgtacaaagcgctatacagaccccagttctctcagg
aaacatgtgaagaccgttcatggtccagaagcacatgtcactaagaagcagcgtggtgat
gcaccacctaaaccgcacccttctaaagggaatggagaaaatgaggcacacacaaagcat
gcaaggggaagaacagacgggtcaggggaagccaacagcaccacccgaggagtggaggat
tgccagcatgtcaaatctatcaagacggaaaacacagtgatgtatcagtccagccctggt
ggtcagtcatcatgtagcagtgagccatcgccacttggcagtgccaccaacaatgacagt
ggagtagagatggctatgtacagtggaggcagtttgggggacctgagtgctttagatgac
acgcctgtagtagattctactggttctccaggtacttctgcaggagtgggtctccagctg
cgcaaaatcaggggaggactactaaaccttgagaacatcaagaaggaaaaactaaaaact
gtaagagagccctgctcctggacgaatgcatcacctcaagtccgaaataccaagctgcct
ccaataccttctattgattcattgctggatactccaaatatgggcattcagatgcctgga
cctccaacccaacgtttaggagacttgtcttcgtacgagatgacaatgttaaatcaactg
caagagcgcagagacagctccaccagcacaatgagctcagcatacacgctaagtcgtcgg
tcctcgggtatttcaccctgctactccagtcgtcgctctagcgaagcttcacaatttggt
gtccgcaacaataacatcagttcagcagactcttatgaccccatctccacagatctgtcg
cgccgttccagcgaagctagtcaatgtggtggtgctggtggactcacaagtttactaagt
ctcacaccggctcaacactaccgtctcaaagcaaaatacgctgcagccacagggggtgca
ccaccaacacctctgcccaacatggatcgcatgagtcttagaactaggatggccctgtac
aatgactcacaggaaagttcggcacatatgcaccattcccaaagtgtagtcaactcaagg
cgctgcagtgacactggctatggcgcacctggcatgatgcctcatgaagttccggctaat
cttccacgacgagcaagcgatcctgttcgtcgtacaactatcgacccgctctccttgccg
agggttcagcgtttcaacagcatcagcaacatgagcctatcacgtctgcctgcgatagat
cgacgtactttcaacttgcagagcaacacctggtctgatggcagcttgcatcgtcatccc
ttcagccagaggccacctagtatttcagagaatgttttaatggagaatatggccactgat
ggaggtgatcagcaagaagacgatttggtgctaccagatgacatggtacagtacctcaac
tcccagaatggtagctcaaatcaggacccagggatttctgtcaacggtggtcatgtacta
gatttacatagtaatatgacctcccaacaacaacagcaattctatgggcagcggcgaatg
ggcatgtcaatcaacaacggtcacgtacagtctgttcgctcagatccggagcaaatagct
gatccgcaaggcatgaacaagaataacatgcctgtacaatggaatgaggtcagttctggt
tctgtggatgcaactgcaaggcttccaaaacagcaacagctgcgagggaacttgacagtg
gttcagcagaagcagaattttggctcttaccaaggctttagcactaatcaacagattgta
ccaatgagccagaatctggctaacctgcaacaggaatatccacagagggtcacccaaagg
atgaattctgtactgcagtatcggcagtctgttaccaatccatgtcagaatctcagcgag
caagtaaaccctcaattgggatatcggcaggacctcaattacaactccagtcaacgccta
acatgcagtggcatgggcccacccaacgggagagcaatgcaaaaccaggagatgcagaat
tacagatccaacttttcacatacaagtaacgtcaaccagcaaaattatgtccctcttact
cagacagccgttcaaaatgcaggcagaggactgatacagcccagacctccgtccgagccc
aaacctttaaataaacaacactcaggttcaggtatgattcagcaaaatggttgctccctg
tccaacgtcaactcctcagaagctagaccaaagagaccaggtgacttcggtcaacacagc
aatgggaatggcactatgtactattcaggagagatccatatgttggatagaagcgtggat
tatggtcctcccatgtctccatgcacaaaccaagcccctgttgcttcactgtctacaatg
gcgtctcctggggttaaccaggtcaccagcacagtggactccactcaaatccttgagcac
actcaaatagactttgatgccattttggatgatggagaccattcgagcctaatgtctggc
acattaagtccaggccttctgcagagtctttcgcagaattcctcacgactcaccaccccg
cgtaactccgttactctagcctcaataccggcaggtattggcaacatggccattggtgac
atgagctcaatgttaacagcccttgcagaggaaagcaaattcttaaacatgatggcttga
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integrated database retrieval system
