Cyprinus carpio (common carp): 109097672
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Entry
109097672 CDS
T05134
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04530
Tight junction
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109097672
09142 Cell motility
04810 Regulation of actin cytoskeleton
109097672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109097672
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
109097672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
PH_9
RBD
SOS1_NGEF_PH
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109097672
NCBI-ProteinID:
XP_042621016
Ensembl:
ENSCCRG00000017887
UniProt:
A0A9Q9YIT8
LinkDB
All DBs
Position
A10:complement(9371102..9433240)
Genome browser
AA seq
1626 aa
AA seq
DB search
MGNIESQNGDHAYYVEGQGQLSRKHMTRSLRISNKQSRRSRHASSSKAEHHNSETSTKSS
STPSIPQSLSENGLEPFNEKNVLEGYGGTIWVDRMAMNLRPMSFHDNMGDPTTTPGSEDG
VEMDTVVADGCEDEGLFTGEDTYLQRTRDGPREGGSFKKKRSKSADMWREDSMEFSLSDL
SQEHLTSTEEIIGTNQNKDKSFTNCGGRHHTSSPRILESHSGERANSLDELCTQRLPPIR
GSHHLYNGHNPERMEGGVMNGEILSPAEEEGNGYGAYTLPCRRSHCLSEGLSNHQSTICS
RMQGRRAQTTHDITAGEGSEYGDSGIDGGAAEVEHSSRRCKTMSASFSVYSTASGSIFAG
SDSGSSSGGGGDRERQPGGDQGVYENFRQELDLNSRQTRECLEEAGSAASDERSSGTLSS
IYPSDILLSMVQGTVRKAGMLAVKNFLVHKKNKRVEPAAKRKWKQYWVSLKGCTLFFYET
DGRSGIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWI
TAIHSACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSAVTDGKKRKT
ILEQIFLWEQNLEQFHMDLFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSV
SSFHALVAARMDGGIRRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDG
EESVKRNLEHMFEDAGKETLKDQEGLVKSLTQHKTDSEVWVPDYLTPSWVSLPDDRPVLA
IIQPGETTMEALEALCRAHRLELSKHYIRLKFLIDNQVQLYIPKPEEDLCDLLYKEIEIC
VKTTKVLQFDRDESCAIGYGFSVAVVEEDGGQQLHITDVKAGGLAFAKGLRAGDEILKLN
SKLASVLQLADMQAAFSLPSLTLTVSTLSATDPHQLCQMPPRRSDGGQDVCTDIFSQSQE
DILDEGLGLVLHSPDVTGEDRVNLMAESPADSLEDETDSEHKSTEQVTAFCRNLHDMNPT
EEPVSCSSFSSTSSSTSSCVPSPISTLPVPFTPRQLSDADKLRKVISELVDTERTYVKDL
NILIERYLNPLQKESFLSQEELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLDKLERVD
QFKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTEPEFKAFLAERNPRQQHS
STLESYLIKPIQRVLKYPLLLRELHSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKIHE
EYGAVFDQLISEQSFDKKEVADLSMGDLLLHDTVVWINPPSSLMKAKRDLELAAFIFRTA
VVFVYKDCSKHKKKMGGSHRASILDEREPFRFRHMISTDALQVRNLPNSEGSAMCEIVHM
RSESEGRPERTFHICCSSPESKKDFLKTVHSILRDKQRRQLMKTESLPPNQQYIPFGGKR
LCALKGSRPTMNRAVSAPSRTLGRRKLIRNRFTIDTSVVFDDGSSQDLSPITPTEPPLSS
LQNPQEPIRDTDRWVEDQFDLQHYENQDDVKETDILSDDDEYCQSVRGPSSDPSLEESLE
ALSVEGDEDKGLNELSEDKPPKSHTPLKLTLLRKQCAVEGVASERDCEVIWVRRDDFKNS
CNSDIF
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagagagccaaaatggagaccacgcctactacgttgaagggcagggccaa
ctctcacgaaagcatatgacccgatcacttcgcatctctaacaagcagtctcgacgatca
cgtcatgcctcatccagcaaggctgaacaccacaactcagagaccagcacaaaatccagc
agcaccccttccatcccacaatccctgagtgaaaatggcctggaacctttcaatgagaag
aatgttttggagggctatgggggcaccatttgggtggaccggatggcaatgaacttgcgg
ccgatgtccttccatgacaacatgggggatccaacaaccacaccaggttctgaagatgga
gtggaaatggacacagtggtggcagacggttgtgaggatgaaggacttttcacaggtgag
gacacatatctgcagaggaccagagatggtcctcgggaaggtggcagtttcaaaaagaag
cgctccaaatctgctgatatgtggagagaggattccatggagttctccctgtcagatcta
agccaagagcatctgacaagcacagaggagattatagggacaaatcagaataaagacaaa
agcttcactaactgtggaggacgtcatcacacctccagcccgcggatactcgagtctcac
tcaggagagagagccaactctttagacgaactttgcacacagagactacctccaattcgt
ggctcccaccatctctataatggtcacaatcctgagaggatggaggggggcgtaatgaat
ggtgagatcttgtctcctgcggaggaggaagggaatggatatggagcatatactcttcct
tgtcgtcgttctcactgcctgtcggaaggactgtccaatcaccagtctaccatctgctca
cgtatgcagggacgacgtgcacaaacaacacatgatatcacggccggtgagggcagcgag
tatggagacagcggtattgacggtggtgcagctgaagtcgagcattcttcacgccgttgc
aagaccatgtctgcgtccttctctgtctactctactgctagcggaagcatcttcgcggga
agcgacagcggcagtagcagcggaggtggaggagaccgtgaacgtcaaccgggtggagat
caaggtgtatatgagaacttccgtcaggagctggacttgaactcccgacagacacgagaa
tgcctcgaggaggccggttcggctgctagcgatgagaggagcagtggaacactaagctcc
atttacccctcagacattctgcttagcatggtgcagggcactgtgcggaaggccggcatg
ctggctgtgaagaacttcctggtgcacaaaaagaataagagggtggagccagcagcaaag
aggaaatggaaacagtactgggtgtcactcaaaggatgcactctgtttttctacgaaacg
gatggacgttcagggattgaccacaacagcatccacaaacatgcagtctgggtggagaac
agcattgtccaggctgtcccagaacatcccaagaaagactttgtgttttgtctgagcaat
gcactcggagatgccttcctcttccagacatcaggtcaaacggagctggaaaactggata
acagccatccactcagcctgcgccgcggccgtcgcccgtcagcaccaccgcgaggacaca
gtacgattgctgcgctctgagatcaagaagcttgaacaaaagatcgatatggatgagaaa
atgaagaagatgggcgaaatgcagctctctgctgtcactgatgggaagaagaggaagaca
atcctagagcagatattcctctgggagcagaatttggagcagtttcatatggacttgttc
cggtatcgatgttacctctccagcctgcagggcggcgagctaccaaatccaaaacgccta
ctcgccgttgcttcccgcccaaccaaactgtccatgggtcgtcttggcattttttcagta
tcatccttccatgccctggtggctgcgaggatggatgggggaattcgaaggcgtacccag
gccctgtctcgttcctccagtaaacgaaagagccgtttctcctctctgtggggtctggac
actacctcaaaaaagaaaaccaaaggcagacccagcatcaaccaggtgtttgtagatggt
gaagagtcggttaagaggaatctcgagcacatgtttgaggacgctggaaaggagacactg
aaggaccaagagggtttggtgaaaagtctcacccaacacaagacggacagtgaagtttgg
gtacccgactatctcacaccatcctgggtctctttacctgatgatcggcctgtgttggct
atcatacagccgggggagacgaccatggaggccctggaggcactgtgcagggctcacaga
ctagaactttccaagcactatatacggctgaagttcctcattgacaatcaagtgcaattg
tacattcctaagcctgaggaggacctctgtgacctgctctacaaagaaatcgaaatttgt
gtcaagacaaccaaagtcctccagtttgacagagatgagtcctgtgccataggctatggt
ttctcagtggcagtagtagaggaggacggaggccagcagcttcatatcactgatgtgaaa
gctggaggtctggcatttgccaaaggtctgcgagcaggtgatgagattctgaaactgaac
agtaagctggcgagtgtgttgcagctggctgacatgcaggctgcgttttctttgccctct
ctcactctgactgtcagcacactgtctgctaccgatcctcaccagctgtgccagatgcct
ccccgccggtcggacggggggcaggacgtctgcactgacatcttctcccagagtcaggag
gacatcctggatgaaggtcttggcctggtgctgcacagccctgatgtcacaggcgaagac
agggtaaacctaatggctgagagccccgctgacagcctggaggatgagacggactcagaa
cacaagagtacagagcaggtgactgctttctgccgcaaccttcatgatatgaatcccacc
gaggaacccgtttcctgttcctcgttttcctccacatcttcctccacttcatcctgtgtg
cccagccccatctcaactctgcctgttcccttcaccccccgccagctctctgatgctgat
aaactccgtaaggtcatcagtgagctggtggacactgagaggacctatgtaaaggacctg
aacattttgatagagcgctacctgaaccccctgcagaaggagagcttcctctcacaggaa
gagctagatgtgctttttggaaacttggcggagatggtcgagttccaagtggagtttctg
aaaactctggaagatggaaccagattagttccagatttagacaaactggagagagtggat
caattcaagaaagttctgttttctcttggtggatccttcctgtactatgcggaccgtttt
aagatctacagtgcattttgtgccagccacacaaaggtcccaaaggtccttactaaagct
aaaacagaaccagagttcaaggcgtttcttgctgagaggaaccccaggcagcagcactcc
tccacgctagagtcctacctgatcaagcccattcagagagtcttaaaatatccactactt
ctgagggagcttcactctctcaccgacccggacagcgaggagcattaccacctggatgtc
gcaatgaaagccatgaacaaagtggccagtcacataaatgaaatgcagaagattcacgag
gagtacggagccgtgtttgaccaactcatcagtgagcagagctttgacaaaaaagaggtt
gccgatttgtcaatgggcgacctcttgttgcatgacactgtggtctggatcaatccaccc
tcttctcttatgaaggcgaagagagacctagagctggctgcgttcattttcagaacggca
gttgtttttgtgtataaagactgctccaagcacaagaaaaaaatgggtggatctcacaga
gcatcgattcttgatgagagagaaccttttcgtttcagacacatgatctctacagacgct
ctccaagttcgcaacctccctaattcagaggggtctgcaatgtgtgagatcgttcacatg
aggtcagaatctgaagggagacccgagaggactttccacatctgctgcagctctccagag
agtaagaaagacttcctgaagacggttcattctatcctgagggacaaacaacgccgtcag
ttaatgaaaactgagagtttacctccaaatcagcagtatattcccttcggagggaagcgg
ctttgtgcgctaaagggttcacgacccacaatgaacagagcggtttcagccccatctcga
accctcggtcgccgaaagctcatccgtaaccgtttcaccatagacacgagtgtggttttc
gacgacggctcatcccaggacctgtcacccatcaccccaacagagcccccgctgtcttcg
ctccagaatccccaggagcccatccgagacacagatcgctgggtggaggatcagtttgac
ctacagcactacgaaaaccaggacgacgtgaaggagaccgacatcctcagcgacgacgat
gagtactgccaatctgtccggggcccttcctctgatccgagtctggaggagtctttagag
gcactatcagtggaaggagacgaagacaagggtctcaatgaactttcggaggacaaacct
ccaaagtcccacaccccactgaagctgacccttctgagaaagcagtgcgcggtggaaggt
gttgcttctgagagggactgtgaggttatctgggttcgcagggacgattttaaaaacagc
tgcaacagcgacatcttctga
DBGET
integrated database retrieval system
