Cyprinus carpio (common carp): 109098066
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Entry
109098066 CDS
T05134
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04530
Tight junction
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109098066
09142 Cell motility
04810 Regulation of actin cytoskeleton
109098066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
PH_9
RBD
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109098066
NCBI-ProteinID:
XP_042588460
Ensembl:
ENSCCRG00000017876
UniProt:
A0A9R0A840
LinkDB
All DBs
Position
B10
Genome browser
AA seq
1625 aa
AA seq
DB search
MGNIESQNGDQAYYGEGQGHLSRKHMTRSLRISNKQSRRSRHASSSKAEHRNSETSTKSS
STPSIPQSLSENGLEPFNEKNALEGYGGTIWGDRMATNLRPMSFHDNMGDPTTTPGSEDG
VEVDTVVADNCDYEGLFTGEDTYLQRTRDGPREGGSFKKKRSKSADIWREDSMEFSLSDL
SQEHLTSTEEILGTNEDEDKGFTACGGRRRTSSPRTLETHSGERANSLDELCTQRLPPLR
GSHHLYNGHNPERTQGGVMNGEILSPAEEEGNGYGAYTLPCRRSHCLSEGLSNHQTTICS
RMQGRRAQTTHDITASEGSEYGDSGIDGGATEVEQFSRRCKAMSASFSVYSTASGSIFAG
SDSGSSSGGGGDRERQPGGDQGIYENFRQELDMNSRQTWDCLEEAVSAASDERSSGTLSS
IYPSDMLISTVQGTVRKAGLLAVKNFLGHKKNKRVEPATKRKWKQYWVSLKGCTMFFYET
DGRSGIDHNSIHKHAVWVENSIVQAVPEHPKKDFVFCLSNALGDAFLFQTSGQTELENWI
TAIHSACAAAVARQHHREDTVRLLRSEIKKLEQKIDMDEKMKKMGEMQLSTVTDGKKRKT
ILEQIFLWEQNLEQFHMDLFRYRCYLSSLQGGELPNPKRLLAVASRPTKLSMGRLGIFSV
SSFHALVAARTDGGIQRRTQALSRSSSKRKSRFSSLWGLDTTSKKKTKGRPSINQVFVDG
EESVKRNLEHMFEDTGKEMLKDQEGLVKSLDQHKTDSDVWVPDYLTPSWVSLPNDRPVLA
IIQPGETTMEALESLCRAYKLELSKHYIRLKFLIENQVQLYVPKPEEDLCDLLYKEIEIC
AKTTKVIQFDRDESCAIGYGFSVVVVEEDGAQQLHITDVKAGGLAFAKGLRAGDEILKLN
SKPASVLELADMQAAFSLPSLTLTVSTLPAADPHQLCQMPPRRSDGAQDLCTDIFSQSQE
DILDEGLGLVLHSPDVTGDNRVNLMAESPADSLEDETDSAHKSTEQVTAFCRNLHDMNTT
EGPVSCSSSSSTSSSSSCVPSPISPLPVLFTPRQLSDADKLRKVISELVDTERTYVKDLN
ILIERYLNPLQKERFLSQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLDKLERVDQ
FKKVLFSLGGSFLYYADRFKIYSAFCASHTKVPKVLTKAKTDPEFKAFLAERNPRQQHSS
TLESYLIKPIQRVLKYPLLLRELHSLTNPDSEEHYHLDVAMKAMNKVASHINEMQKIHEE
YGAVFDQLISEQSSDKKEVADLSMGDLLLHETVIWINPPSSLMKGKRDPELAAFVFRTAV
VFVYKDCSKNKKKIGGSHRASVLDERDPFRFRHMISTDALQVRNLPNSEGSAMCEIVHMR
SESEGRPERTFHICCSSPESKKHFLKTVHSILRDKQRRQLMKTESLPPNQKYIPFGGKRL
CALKGSRPTMNRAASAPSRTLGRRKLIRNRFTIDTSVVFDDGSSQELSPISPTEPPLSSL
QKPQQPIRDTDRWVEDQFDLQHYENQDDVKETDILSDDDEYCQSVRGTPSEQSLEESLEA
LSVEGDEDKGLNGLSDDKPPKSHAPLKLTLLRKQCAVEGVASERDCEVIWVRRDDFKNSC
NSDIF
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacatagagagccaaaatggagaccaagcctactatggtgaggggcagggccat
ctatcacgaaagcacatgacccgatcacttcgcatctctaacaagcagtctcgacgatcg
cgtcatgcctcatccagcaaggctgaacaccgcaactctgagaccagcacaaaatccagc
agcaccccttccatcccacaatccctgagtgaaaatggcctggaacccttcaatgagaag
aatgctttggagggctatggaggcaccatttggggggaccggatggctacgaatttgcgg
ccgatgtccttccacgacaacatgggggatcccaccaccacgccaggctctgaagacgga
gtggaggtggacacagtggtggcagacaattgtgattatgaaggacttttcacaggtgag
gacacgtatcttcaaaggaccagagatggtcctcgggaaggtggcagctttaagaagaag
cgctccaaatctgctgacatttggagagaggattccatggagttttccttgtcggatcta
agccaagagcatctgacaagcacagaggagattttagggacaaatgaggatgaggacaaa
ggcttcaccgcctgtggaggacgccgtcgcacctccagcccgcggacactcgagactcac
tcaggagagagagccaactctttagatgaactttgcacacagaggctacctcctcttcgt
ggctcccaccatctttacaatggtcacaatcccgagaggacgcagggtggtgtaatgaac
ggtgagatcttgtctcctgcggaggaggaagggaacggatatggagcatacactcttcct
tgtcgtcgttctcactgcctgtcggaaggactgtccaatcaccagactaccatctgctca
cgtatgcagggacggcgggcacaaacaacacatgatatcacggccagtgagggcagcgag
tatggagacagcggtattgatggcggcgcaactgaagtcgaacaattctcacgccgttgc
aaggctatgtctgcgtccttctccgtctactctactgctagcggaagcatcttcgcagga
agcgacagcggcagtagcagcggaggtggaggagaccgtgaacgtcaaccgggtggagat
caaggcatatacgagaacttccgtcaggagctggacatgaactcccgacagacgtgggat
tgcctcgaagaggcagtttcggctgctagcgatgagaggagcagtggaacgctaagctcc
atttacccctcagacatgctaattagcacggtgcagggcactgtgcggaaggccggcctg
ctggctgtgaagaacttcctgggccacaaaaagaataagagggtggagccagcaacaaaa
aggaaatggaaacagtactgggtatcactcaaaggatgcactatgtttttttacgaaacg
gatggacgttcggggatcgaccacaacagcatccacaaacatgcagtctgggtggagaac
agcattgttcaggctgtcccagaacatcccaagaaagactttgtgttttgtctgagcaat
gcactgggagatgccttcctcttccagacatcaggtcaaacagagctggaaaactggata
accgccatccattcagcctgcgccgcagccgtcgcccgtcagcaccaccgcgaggacacc
gtacgattgctgcgctctgagatcaagaagcttgaacaaaagatcgacatggatgagaaa
atgaagaagatgggcgaaatgcagctctctaccgtcactgatgggaagaagaggaagact
atcctagagcagatatttctctgggagcagaatttggagcagtttcatatggacttgttc
cggtatcgctgttacctatccagcctgcaaggcggcgagcttccaaatccaaaacgccta
ctcgccgttgcttcccgccccaccaaactgtccatgggtcgtcttggcattttttcagta
tcatccttccatgccctggtggcagcgaggacggatgggggaattcagagacgtacccag
gccctgtctcgttcctccagtaaacgaaagagccggttctcctctctatggggtctggac
actacctcaaaaaagaaaaccaaaggcagacccagcatcaaccaggtgttcgtagacggt
gaagagtcggttaagaggaatctcgagcacatgtttgaggacactggaaaggagatgctg
aaggaccaagagggcttggtgaaaagtctcgaccaacacaagacggacagtgacgtttgg
gtacctgactatctcacgccgtcctgggtctctttacctaatgatcgtcctgtgttggct
ataatacagccaggggagacgacaatggaggccctggagtcactgtgcagggcttacaaa
ctggaactttccaagcactatatacggctgaagttcctcattgagaatcaagtgcaattg
tatgtccccaagcctgaggaggacctctgtgacctgctctacaaagaaattgaaatttgt
gccaagacaaccaaagtcatccagtttgacagagatgagtcctgtgccataggctatggt
ttttcagtggtggtagtagaggaggatggagcccaacagcttcatatcactgatgtcaaa
gctggaggtctggcatttgccaaaggtctgcgagcaggtgatgagattctgaaactgaac
agtaagccggcgagtgtgttggagctggctgacatgcaggctgcattttctttgccctct
ctcaccctgactgtcagcacgctgcccgctgccgatccgcaccagctgtgccagatgcct
ccccgccgatcggacggggcacaggacctctgcactgacatcttctcccaaagtcaggag
gacatcctggatgaaggtcttggcttggtgctgcacagccctgatgtcacaggcgacaac
agggtaaacctaatggctgagagccctgctgacagcctggaggatgaaacggactcggca
cacaagagtacagagcaggtgactgctttctgccgtaaccttcatgatatgaataccacc
gagggtcctgtttcctgttcctcatcttcctccacatcttcgtcttcatcctgtgtgccc
agccccatctcacccctaccagttctcttcaccccacgccagctctccgatgctgataaa
ctgcgtaaggtcatcagtgagctggtggacactgagaggacctatgttaaggacctgaac
attttgattgagcgctacctgaaccccctgcagaaggagagattcctctcacaggatgag
ctggatgtgctttttggaaacttggcggagatggtggaattccaagtggagtttctgaaa
actctggaagatggaaccagattagttccagatttagacaaactggagagagtggatcaa
ttcaagaaagttctgttttctcttggtggatccttcctgtactatgcagatcgttttaag
atctacagtgctttttgtgccagccacacaaaggtcccaaaagtccttaccaaagctaaa
acagacccggagttcaaggcattcctggctgagaggaaccccaggcaacagcactcttcc
acgctggagtcctacctgatcaaacccattcagagagtcttaaaatacccactactcctg
agggagcttcactcccttaccaaccctgacagcgaggaacattaccatctggatgttgca
atgaaagccatgaacaaagtggccagtcacataaatgaaatgcagaagattcatgaggag
tatggagccgtgtttgaccaactcatcagcgagcagagctctgacaagaaagaggttgct
gacctgtcaatgggtgacctcttgttgcatgaaactgtgatctggatcaacccaccctct
tctctcatgaaggggaagagggacccagagctggctgcgtttgttttcagaacagcagtt
gtttttgtgtataaggactgctccaagaataagaaaaaaatcggtggatctcacagagca
tcagtccttgatgaaagagacccttttcggtttagacacatgatctctacagatgctctc
caagttcgcaacctccctaactcagaggggtctgcaatgtgtgagattgttcacatgagg
tcagaatctgaagggagacccgagaggaccttccacatctgctgcagctctccagagagt
aaaaaacacttcctgaagaccgttcattctatcctgagggataaacaacgccgtcagtta
atgaagactgagagtttgcctccaaatcagaagtatattcccttcggagggaagcggctt
tgtgcgctaaagggttcacgacccacaatgaacagagcggcttcagccccatctcgaacc
ctcggccgccggaagctgatccgtaatcgtttcaccatagacacaagtgtggttttcgac
gacggctcatcccaggagctctcacccatctccccgacagagcccccgctgtcttcacta
cagaaaccccagcagcccatccgagacacagaccgctgggtggaggatcagttcgacctg
cagcactacgaaaaccaggatgacgtgaaggagacggacatcctcagtgacgacgatgag
tactgccaatccgtccggggcactccttctgagcagagtctcgaggagtctttagaggcc
ctttcagtagaaggagatgaagacaaaggtctcaacggactttcggatgacaaacctcca
aaatcccacgcccccctgaagctgaccctcctgagaaagcagtgtgcggtggagggtgtc
gcttctgagagggactgcgaggttatttgggttcgcagggatgattttaaaaacagctgc
aacagtgacatcttctga
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integrated database retrieval system
