Cyprinus carpio (common carp): 109099339
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Entry
109099339 CDS
T05134
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109099339
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109099339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109099339
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109099339
Membrane trafficking [BR:
ccar04131
]
SNARE
SNARE associated proteins
Others
109099339
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
109099339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
109099339
NCBI-ProteinID:
XP_018968386
Ensembl:
ENSCCRG00000005498
UniProt:
A0A9Q9ZJM0
LinkDB
All DBs
Position
A12:3691843..3709192
Genome browser
AA seq
1033 aa
AA seq
DB search
MLATQTPESGPEARDVKQWIKEKIARTLKVLQKRYITTDTAVTSEDLEANLLCCALETVF
IHGIKSKFIRFDGSHTRKGGSRGALPQPVFWSLLKTVTHRDVVQELERLSFINSDIGRCR
AWVRLALNDGLLECYLASLFREGSKLGSYYQPGALLLDPEDREVLLTLLQGLSSMTFQLS
YKSAVLNEWTNTPLVLAGLCTPTPVDEHLVGPKRKESWDTVSQSSAGSGGSDWAQEALQR
EPRKEQSEGCEPNAPLTSSNLSLDTSGSSQLSSSLSSDSLLQGQELRSPEKEHWSCDPEI
SQNTQQKITATEENSSSNQDLKEDFMFIPASDSAARAVDESTHMPDASPTAAQDTHQSDA
HVSGQAEASSEKLSAETEEETVEESETLDKTVIETAESEQKKDSSVDTSTEKTSDPGTLP
PETSTVSSSVEQSQHAAYRRSASTVSRKTSSDSLYSSCKSTSWISEDDFYKPEEMGSSEA
YAVIDIAQMNGQVTSTSESDTVQTPPSVVHRRHNGLPNPFRGLLKLGQLERRSAVGMWRN
YYCELSPFELRLYINAEERICHENLSLLRCEDVHLSSSNEGRFRVSFPSKRIYLRAPSRG
EAEDWVDRIVEAISKLRPTMRDEQWEVLHTSSDQDVPSPTPSSPDPPQLDWTRHKDPEPD
AIKEAVVYQNLEEKGWRSVLLSLSLEALRGYRVQGDCKMPLFSYSIGSIRDVVPDVSLGS
PAFFKVLTAQDTLTLRAESGEAAQGWRSLIRGALDSYLDTEDDGALQGVSAVGSVLKLVQ
HRLKGDGVLLSHLSTVPNERGLDAQNYKCAGCPHQIGMSLGRARLCEFSGQYYCESCHQG
DTTIIPSRMVHNWDLTMREVSKQAFKLLTQIEHEPLLNLDVLNPDLFDHTEIMATVQSLR
QRLRFLGDYILICRSGISKKIQPRLQQRTYLLDNSDLYSVLDLQQIADEHYESYLQSLIQ
FGSKHVLNCDLCTQRGFICQICNTDNIIFPFQFDSTTRCNVCKTVYHSSCKAKCPVCPRC
VRIQKYMERDLED
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccaaacacctgagagcggcccggaggcaagagatgtaaaacagtggatc
aaggaaaagatcgcacggaccctaaaagtcctgcagaagcgttacatcaccacagacacg
gcggtcaccagcgaggacctggaggctaacctgctgtgttgtgctttggagacggtcttc
atccatgggatcaagagcaagttcattcgatttgatggaagtcacacgcgcaaaggaggg
tcacgaggagcccttcctcagcctgtcttctggagcctgctgaagaccgtcacccacagg
gatgttgttcaagaattggaacgtctaagcttcataaactcagatatcggccgctgcaga
gcatgggttcggctggcgctaaatgatgggcttctggagtgttacctggcctcgctgttt
cgtgaagggtccaaattgggctcttactaccagcccggggctcttttgctggacccggag
gaccgcgaggttctcctcaccctcctgcagggtttatcctcgatgaccttccagctctct
tataaatcagctgtgctgaatgagtggaccaacacaccgctggtcctcgcgggtctttgt
acaccaacgcctgtcgacgagcaccttgtaggccccaagcgcaaggagtcttgggatacg
gtctcccagtcatccgcagggtctggaggctcagactgggctcaggaggcactccagagg
gagccgaggaaagagcagagcgagggatgtgagccgaacgctccgctgacatcgtcaaac
ctgagtctggatacgtccggatcatcacagctctcctccagcctgagctctgatagtctg
ctgcagggtcaggagctcaggagtccagagaaggagcactggagctgtgacccggagatc
agccaaaacacacaacagaagatcactgctacagaagagaacagttcctctaatcaggac
ttgaaggaagactttatgttcataccagcttcagactctgcagcacgagctgttgatgag
agcacgcacatgcctgacgcgtctccaacagctgcacaggacacacatcaatcagatgca
cacgtctcaggacaagctgaagcaagctcagaaaagctgtcagctgagacggaagaagag
acagtggaagaatctgagactctagataaaaccgtcattgagactgcagaaagcgagcag
aagaaagactcatctgttgatacttcgaccgagaagacgtctgaccccggcactcttcct
ccagagacctctactgtctctagttcagtggagcaatcccaacatgctgcatacagacgc
tctgcgagtaccgtcagcaggaaaacctcctcagactctctgtattcctcctgcaaatcc
acatcttggatatcagaggatgacttctacaagccagaagaaatgggcagttctgaagca
tatgccgtcattgacattgcgcagatgaatggacaggtgacgtctacctctgaatcagac
accgtccagacaccacctagtgtagtgcaccggagacacaacggtcttcctaacccgttc
aggggtctgctgaagctgggtcagctggagcgccgcagtgcggtgggcatgtggcgcaat
tattactgcgagctctctccatttgagctgcggctttacatcaacgcagaggagcgcatc
tgccatgaaaacctgtccctgctgcggtgcgaagacgtccacctgtcctccagtaacgag
ggccgattccgggtatccttcccgagcaaaagaatctacctgcgtgcaccgtctcgagga
gaggcggaggactgggtggatcgcatcgtggaggccatcagcaaactacggcccacaatg
agagacgaacagtgggaggtgctgcacacgtccagcgaccaggacgtcccctcaccgaca
ccctcaagccccgatcctccacagttagactggacccgtcataaggacccagagccagat
gccataaaggaagcggtggtctatcagaacttggaggagaagggttggcgctctgtttta
ctctctctctccttggaggccctcagggggtaccgggtccaaggggactgcaagatgccc
ctcttctcatactccattgggagcatcagggacgtggttcctgatgtttctttaggaagt
cctgcgttttttaaggttctgactgcgcaggacactctgacgctgagggcggagagcgga
gaggcagcgcaaggatggaggagtctgatcagaggagcgctcgactcgtatctggacacg
gaggatgatggagcgcttcagggcgtctcagcagtgggcagtgtcctcaaactggtccaa
cacagactgaagggagatggggtgctgctgtctcacttgtctactgtcccgaatgagagg
ggactagatgcacaaaactataaatgtgcaggctgccctcatcagatcgggatgtctctg
gggagagccagactctgtgagttctcaggtcagtactactgtgagagctgccatcaggga
gacacaaccatcatcccctcccgcatggtgcacaactgggacctaacaatgcgtgaggtc
tcaaagcaagccttcaagctgctgacacagattgagcacgagccgctcctgaacctggac
gttttgaatcctgacctgtttgatcacactgagatcatggctacagtgcagagcctgaga
cagaggcttcgtttccttggagattacatcctcatctgccgcagtggcatcagcaaaaaa
atccaacccagacttcagcagcggacatacttactggataacagtgatctgtacagtgta
ttggacttgcagcagatagcagacgagcactacgaatcttacctgcagtctctgattcag
tttgggtccaagcacgtgctcaactgtgacctttgcacccaaagaggctttatatgtcag
atctgcaacactgacaacatcatcttcccttttcagtttgacagcaccaccaggtgtaac
gtctgcaagacagtgtatcattcctcctgtaaggcgaagtgtccggtctgtccacgctgc
gttcgcatacaaaagtacatggagagggacttggaggactga
DBGET
integrated database retrieval system
