Cyprinus carpio (common carp): 109100105
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Entry
109100105 CDS
T05134
Name
(RefSeq) F-box/WD repeat-containing protein 7-like isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109100105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109100105
04121 Ubiquitin system [BR:
ccar04121
]
109100105
Membrane trafficking [BR:
ccar04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
109100105
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
109100105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_C
WDR55
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_DCAF12
F-box
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
PQQ_2
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT140_2nd
Ge1_WD40
Beta-prop_LRRK2
KNTC1_N
WD40_like
Beta-prop_IFT140_1st
eIF2A
CDtoxinA
Beta-prop_NWD2_C
PALB2_WD40
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
109100105
NCBI-ProteinID:
XP_042573562
UniProt:
A0A9Q9ZTM8
LinkDB
All DBs
Position
A1:complement(2527281..2602329)
Genome browser
AA seq
606 aa
AA seq
DB search
MLRHCPIPRFSSASPRRKTTKSSGKEKAPQALPESRALELADPKDVPKEPIPPQKVLKIF
SINIIAQSLPFCRRRMKRKLDHGTEVRSFPSGKKPCPSPTGLPFPATPTTFRDFRVNGQR
RRITSIQPPTGLQEWLHTFQSWSGPEKLLALDELIDRCEPTQVKHMMQVIEPQFQRDFIS
LLPRELALHVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLYIRRKKVI
KPGFTHSPWKSAYIRQHRIDTNWRRGDLKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNT
LKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS
TVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFM
VKSFKVKTETCLWRLRFGCTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ
SLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVITSS
DDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD
FDVDMK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcattgccccattccccgcttctcgtcagccagcccgaggagaaagacgacc
aagtcctcgggcaaggagaaggctccccaggctctaccggagagcagggcactggagctg
gctgaccccaaggatgtccccaaggagcctatacccccccagaaagtcctcaagatcttc
agcatcaacatcatagctcaaagtctgcccttctgtcgcagacggatgaagaggaagttg
gaccatggcaccgaggttcgatctttcccttcaggaaaaaagccctgtccaagtcccaca
ggactgccgttcccagccacccccactacgtttcgggactttcgagtcaatgggcagaga
cggcgcatcacgtccatccagccccccacaggcctgcaggagtggctccacacctttcag
agctggagtggtccagagaagctgctggcgctggatgagttgattgaccgctgtgagccc
acgcaggtgaagcacatgatgcaggtgatcgagccacagtttcagagagacttcatctcg
ctcctgcccagagagttggccttacacgtgttgtcatttctggagccaaaggatctgctc
caggcggctcagacgtgtcgttactggcgcatcctagcagaggacaacctgctctggagg
gagaaatgcaaagaagaaggtattgacgagcccttgtacataaggagaaagaaggtgatc
aagccagggttcacacacagtccctggaagagtgcctacattagacaacacagaatagac
accaactggaggagaggagacctcaaatcaccgaaggtgctgaaaggccacgacgatcat
gtgatcacctgtctccagttctgtggaaaccgcatagtgagcggctcagacgacaacacg
ctcaaagtatggtctgctgttaccgggaagtgtttgcggacgttagttggccacaccggt
ggggtctggtcctctcaaatgcgagacaacatcattatcagtggctccacagaccgaacg
ctgaaggtctggaatgcagagacgggagaatgtatccacacgctgtacggtcatacctca
acggtgcgctgtatgcacttgcatgagaaaagggtggtgagcggttcccgggacgccacg
ctgcgggtttgggacattgagacgggtcagtgtttgcacgtgctcatgggtcacgtggcg
gccgttcgctgcgtacagtatgacggccggagggtggtcagcggggcctatgacttcatg
gtgaaatcttttaaagttaaaacggagacttgcctctggcgattacgttttggttgcacc
aacagagtatatagcctgcagtttgacggcatccatgtggtgagcggttcgttggacacg
tcgatccgggtgtgggatgtggagactggaaactgtattcacacgctcacaggtcatcag
tctctcaccagcggcatggagctcaaagataatatcctggtctccggaaacgcagactcc
accgtcaagatctgggacatcaagaccggccagtgcctacagacactgcaaggtccccac
aagcaccagagtgcagtcacatgcctgcagttcaacaagaattttgtcatcaccagctct
gatgacggtacggtgaagctgtgggacctccggacgggcgagttcatccgtaacctggtc
acactggagagcggcggcagcggcggcgtggtctggcggatccgagcctccaataccaaa
ctggtttgcgcggtgggcagccgtaacggcacggaggaaaccaagctcctggtgctggac
ttcgacgtggacatgaagtga
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