Cyprinus carpio (common carp): 109102309
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Entry
109102309 CDS
T05134
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109102309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109102309
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Growth factors (RTK binding)
109102309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
109102309
NCBI-ProteinID:
XP_018971195
Ensembl:
ENSCCRG00000019539
UniProt:
A0A9Q9ZK36
LinkDB
All DBs
Position
B7:complement(18405983..18423439)
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AA seq
278 aa
AA seq
DB search
MFQQVRRVMTILFVTMVISYFSCMRAAPMREIPGVQGGHRAEGYLGAAAAAAAAITSGSR
GHGTPQSGGGLPSLTDTFEQVIEELLEVEGEATQQLGPGADQGQGGGGPAAMADSKDVDM
YASRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVT
ALDKKTAIDMSGQTVTVLEKVPVTNGQLKQYFYETKCNPLGYTKEGCRGIDKRHYNSQCR
TTQSYVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacaggttagaagagtgatgaccatcctgttcgttactatggttatttcatac
ttcagttgcatgagagctgcgcccatgagagagatcccgggcgtgcaggggggccaccga
gccgagggctacctgggcgccgctgccgccgccgccgctgccatcacctcaggcagccga
ggccacgggactccacagagtgggggcgggctgccctcgctcacggacactttcgagcag
gtgattgaggagttgcttgaggtggaaggagaggcgacgcagcaactggggcccggggcc
gaccagggccaaggagggggcggtccagcagccatggctgactcgaaggatgttgacatg
tacgcctcacgggtgatgatcagcaaccaagtgcctttggagccgccgttactctttctc
ttggaggaatacaaaaactacctggatgccgccaacatgtcgatgcgcgtgcggcggcac
tcagaccccgcgcggcgaggggagctcagcgtttgtgacagtattagccagtgggtgacg
gctctggacaaaaagacggccatagacatgtcgggccagacggtcaccgtcctggagaag
gtccccgtgactaacggtcagctgaagcaatacttttacgagaccaaatgcaacccctta
gggtacacaaaggagggctgccgaggaatagacaagcggcactataactcgcaatgccgg
acaacccagtcttacgtgcgagcccttaccatggatagcaaaaggaagatcggctggcgg
tttatacggatagacacttcgtgtgtatgcacattgaccattaagaggggcagatag
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