Cyprinus carpio (common carp): 109108719
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Entry
109108719 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109108719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109108719
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccar04054
]
109108719
Membrane trafficking [BR:
ccar04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
109108719
Pattern recognition receptors [BR:
ccar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109108719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
zf-C3HC4_4
zf-RING_UBOX
CARD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
NOD2_WH
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
U-box
nSTAND3
AAA_16
AAA_25
Motif
Other DBs
NCBI-GeneID:
109108719
NCBI-ProteinID:
XP_042574835
Ensembl:
ENSCCRG00000047240
UniProt:
A0A9Q9W0Z3
LinkDB
All DBs
Position
B2:25697659..25706861
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AA seq
1318 aa
AA seq
DB search
MAEASISWAEDRVICPICLDLLKDPVVIPCGHSYCMSCITDFWDQDDQKGVYSCPRCKQT
FSPRPVLGGNKRTEKPSKAVMVMLMLTPKQSYDLDYGEIEELHSFKSDLQLRDVLERQVM
KIYGTEQVRWNKSSVIDKSKFVAEYNLDALVYLAACNPEPVIIQRSKEQTKKYYCEHVRS
VDALSHLLSNDKNRSIRIDQLFSPDCDGNTPKTVILSGDSGRGKSFTLQKIMLDWATGEL
YSENFDVIFLLKFEELKCISEEICLFELLSWSCSLTSYQILQILQLTTPEKVLFLTDGID
ECISSPQSFDXLVLTNPSDRARPMDILRSVLKGILLPESFILITTRSLAADAVMNLLKGP
QRFTEIVGFSERGVQEYFQKYFQDEQLFRKTYERVKINESLLTACSVPLLCWMVCFCLKK
HFTDDDHVMRELKTTTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAEEGVKKQQVFFDE
KSVAKTGLDPATTLFLYKDDLRGKEKHQTIYKFIHFSFQEFFAALYYVLSDEEVPWWKFS
ELFNLMESESLICRSSPILRGKLSNPIPSVMMFLCGLLNEKVSSSIFQKIRWTVPHTMKL
KKRELKKKLMKRIPAMTRYYGFELFALHCLYELQDERFVMKALKTQNFMDLSNISLRSTD
CWVLLYCLQCCPHIRDLNLMYCDLTAEKLKILQPALCMCEILRLSVEHLSEVGDLIQILC
EAKILRELKVQEDENRAESPRWSLDLSVTHGDVLLTLSSSEKNVSFPAVLNITLRCPQSE
ISSTDWTLFLQRLSKTAKLADDSSALDEHVSLLLSSFHSVGLKMLYLKLVSLNESWASGI
ISLVQTCTSLQQLNVSVTGLLLEEVLVLLKTSLNDPHCTVIIKGRKCSKSTDQCKEQDWS
HSCNEKVEIHFKPKVLEKLRELNISDSEPSGLNLQPLPVCQSCVHIVDSDQWVQVEPSVC
TDGGSEFRISTPAGRFECSRTRMRWVCAGDVTLQYRAVDGGFLSEELERLQCERIGPVID
VTVISGKLEEAHLPHYACLVESDPSLRDTVKLLTKRDEGISLQSVELTCYHAKIVQPSFS
LTTLIISWFIKWEEHCNLLLYMRCKDPLILHIYFFSSNDTCSKEKVEQNEKSSLLISHPR
PNRPFRLKTPHLLEVPGASVHPIEGISFRTDIDPNFFKVKQHQHDDVKMNLIREEDRKSV
WKATIWKEEFDPVNPRQIQKVLHLCSEFGKGQFFEKHRSTLIKRVKNVKSIADKLREQRI
IHEELYSEITYTNLTCQDSMRKICSTVHSNGVIAKGKFIVILQEEEPHLFEELVHSDS
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagccagtatttcatgggctgaggatcgggtcatctgtccaatctgtctggat
ctactgaaggatccagtggtcattccctgtggacacagttactgtatgagctgcattaca
gacttctgggatcaggatgatcagaagggagtctacagctgccctcggtgcaaacagacc
ttcagtccaagacctgttttaggtggaaacaagaggactgaaaaaccgtccaaagcagtt
atggttatgctaatgctaacacctaagcagtcttatgatctggactatggtgaaattgaa
gagttgcatagtttcaagtcagacttacaactcagagatgtcctagaaagacaggtgatg
aaaatatatggaacagagcaggttcgttggaacaagtcttcagtcattgacaagtctaag
tttgtggcagagtataatcttgatgcacttgtctatctggctgcctgtaatcctgaacca
gtgatcattcagaggagcaaagagcaaactaagaaatactattgtgaacatgtgaggtct
gtggatgctttatctcatctgttatcaaatgacaagaatcgcagcatcagaatagatcag
ctgttcagtcctgactgtgatggaaacacaccaaaaactgtgattctcagtggagattct
ggaagagggaaatccttcacgctacagaagatcatgttggactgggcaactggagaactt
tactctgaaaactttgatgtaatttttcttctgaagtttgaagagctgaagtgtatttct
gaggagatttgcttgtttgagctcttgagttggagttgcagcttaacatcatatcagatc
ttacagatactgcagttaacaacaccagagaaagtcctcttcctcactgatggaattgat
gagtgtatttcatccccccagtcatttgatnngttagtactcacaaatccttccgataga
gcccgacctatggacattcttaggagcgtgttaaagggaatcttgctgcctgagtcattc
attcttatcaccacaagatctctagctgctgatgcagtgatgaatctcctcaagggtcct
cagcgtttcactgagattgtgggcttctctgagagaggggtgcaggagtacttccagaag
tattttcaggatgagcagctcttcaggaaaacatatgagagagtgaagataaatgaaagc
ctcctgactgcctgctctgtgcctttgctgtgttggatggtctgtttttgtctgaagaaa
cactttacagatgatgatcatgtgatgagagaactaaagacaaccacctccatttatgtg
cactttgtgtccactctactggagcatcatgaccagagtcagtctgtcctcaccatgctg
aggagtctgggtcagctggcagaggaaggggtgaagaagcagcaggtcttttttgatgaa
aagagtgtagccaagactggcttagatcctgctactactttgttcttgtataaagatgat
cttagaggaaaagaaaaacatcagacaatttataagttcatccatttcagctttcaggag
ttctttgctgcactttattatgtattgtcggatgaagaagtgccctggtggaaattcagt
gagctgtttaacttgatggaatcagaatctttaatttgcaggtcatctcctattttgaga
ggtaaactatcaaatcccatcccttcagtcatgatgtttctctgtggtctcttaaatgag
aaggtgagcagctcaatctttcaaaagatcaggtggactgttcctcacaccatgaaactg
aaaaaaagggaactaaagaaaaagctgatgaaaaggattcctgcaatgacacgatactac
ggatttgagttatttgctctccactgtctatatgagctccaggatgagagatttgtcatg
aaagctcttaaaacacaaaacttcatggatctgtctaacatttccctgaggagcacagac
tgttgggtgctgctgtactgtcttcagtgctgtccacacatcagagacctgaacctcatg
tactgtgatttaacagctgagaagctcaagattcttcagccagcactctgtatgtgtgag
attctgagattgtcagtggagcacctgtcagaagttggagatttgatccagattctgtgt
gaagcaaaaatcttgagagaactgaaagttcaggaagatgagaaccgtgctgagagtccc
agatggtcacttgacctgtcagtcactcatggagatgttctgctaactttgagctcctca
gagaagaatgtgtcatttcctgcagtcttaaacatcactcttagatgtccacaatcagag
atatccagcactgactggacactcttcttgcagagactcagcaagacagcaaaattagca
gacgattcttcagctcttgatgagcatgtcagtttgctgctgtcttcatttcactctgtg
ggtttgaagatgctgtatcttaagctggtcagtctgaatgagagctgggcttctgggatc
atttcccttgtccagacctgcaccagtctacagcagctcaatgtgagtgtcactggatta
cttttggaggaggtactcgtgttactgaagacatcactgaatgatccacactgtactgtc
atcattaaagggaggaagtgcagtaaatccactgaccagtgcaaagaacaggactggagt
cacagctgtaatgagaaagtggagattcacttcaaaccaaaggttttggaaaagctgaga
gaactgaacatctctgactctgaaccgtctggactgaatcttcagccgctcccagtgtgt
cagtcttgtgttcacattgttgactctgatcagtgggttcaggtggagccgtcagtctgt
acagatggaggatcagagttcaggatcagcactccggcgggtcgattcgagtgcagcagg
accagaatgcgatgggtctgtgctggtgatgtcactctccagtaccgtgcagtggatgga
ggtttcctcagtgaagagctggagaggcttcagtgtgagcgaattggtcctgtgattgat
gtgacagtgatctcagggaaactggaggaggcccatctgcctcattacgcctgtttagta
gagtcagacccctctctcagagatactgtgaagctcctcaccaaaagagatgaaggaata
tctttacaatctgtagagttgacctgttatcatgccaaaatagtccaaccatccttctct
cttacaactctaattataagctggttcataaagtgggaagagcactgtaatcttcttctg
tacatgcggtgtaaagatcctctcattcttcacatctactttttttccagtaatgacact
tgttcaaaagaaaaagttgagcagaatgaaaaatcaagtcttttgatcagtcatcccaga
cctaacagaccatttcggttgaaaacacctcaccttcttgaggttcctggtgcttctgtc
catcccatagaagggatttcatttagaacagacattgacccaaacttcttcaaggtcaag
caacatcagcatgatgatgtaaaaatgaatcttatcagagaggaggacaggaagtctgtg
tggaaggctacaatatggaaagaagaatttgacccagtaaatccaaggcaaatccaaaaa
gttctgcatctgtgttctgagtttggtaaaggtcagttctttgagaaacacagatcaact
ctcattaaaagagttaaaaatgtgaagagcattgcagataaactgcgtgagcagagaata
attcatgaggaactatattctgaaatcacatatactaatttgacctgtcaggatagcatg
agaaagatctgctccacagtgcattcaaatggtgtgattgcaaaaggtaaattcattgta
attcttcaggaagaagagccccatctctttgaagaacttgtgcattcagattcttaa
DBGET
integrated database retrieval system
