Cyprinus carpio (common carp): 109111060
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Entry
109111060 CDS
T05134
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein homolog
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109111060
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109111060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
Motif
Other DBs
NCBI-GeneID:
109111060
NCBI-ProteinID:
XP_018979572
Ensembl:
ENSCCRG00000008289
UniProt:
A0A8C1RTD2
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All DBs
Position
A13:complement(16477710..16481283)
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AA seq
835 aa
AA seq
DB search
MTRLALEQVTDFGDFTKGKDLKEFFKQAYSNISSQNCLSDVRLSPDGRHIHVIVRQPKSG
LMTHDKYQRAHLMQCQKHVELVLTGNVPIVDVIYIPQSKPEDGASVLGVIFENGRVEFWK
FLECRSGWHLLQTVDLCKSPRAKVISVCMCQNFIIWCEERPPSENSNSVSSNLRFCICKK
TVEVNEGGVSLGNVKIALHNNPRFTTISSGDLVYLLPDMRENSSMGVSKVFLAWSPEHDS
FKVHSACSCTLMKSSSKESDFKRLVTDCIGLLSTIDPPDICGFSSTGCGDLLLLLSTGWV
CIMKRDSCLRNIYKLPDNCLSASGSQNNSLNIYNEILALTIGRTLFLIDTKCGLELERIS
LKTEGLLFVNTLDSHSPQMLSETGLFVVTQNPKISSTLSEDSSALLVEAVFEEACKYYQQ
RSLSSTQLTVEKLKKGGMFQAPISLAAILRDYLSNQKTKTGEKHSTGQERLMSSLESELR
SLVLLEDIKTSMVTASEKDLDNYCESLVQQEICRLLSGELERENLQYLNGIFHLFPTYSW
HAIQVVLHLRCSGEGLLSSKAPADLWKIILSPVQPTANFAHCNGQQKHTVVPVFELLCHS
IFKFQPSWLPRFLELAQQQSGGSSKSSWGYGMKESSESMPLYKRAMTVLPCNGTYQQLEV
ELLLCSERPKAIMQALRILIKQGQWVQVAQVAERFCRQSPLLNKEIFSALLCEVSQHRDL
DPYLDLLWTLCPEDMTVTSILNIVLKNLPDSTQNSGPFEAHGSQVTIGLLKPLLRKVLQR
ETKPSQRYADILQSPTVPPLTPPRQPKGLFRDAEQKETKQRTSSGSQATCQARLV
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgactcgcattggaacaagtgactgatttcggcgacttcacgaaaggaaaggac
ctaaaagagtttttcaaacaggcatactccaacatctcatctcaaaactgtctgtctgat
gtgcgtctgagtccagatggacgtcacattcatgtcattgtgcgtcagcccaagagtggt
cttatgacacatgacaaatatcagcgagcccatctcatgcaatgccagaagcacgttgaa
ttagtgctaactggaaatgtgcctatagtggatgtcatttatatccctcaaagcaaacca
gaagatggagcctctgtgttgggagttatttttgagaatggaagagtggaattctggaaa
ttcctagagtgcagatcaggctggcatttactccagaccgtggatctgtgcaagagccct
cgtgctaaagtaatttcggtgtgcatgtgtcagaatttcattatatggtgtgaggagcga
ccaccatctgagaactccaatagcgtgagcagcaacctcaggttctgcatctgcaaaaag
actgtagaagttaatgaggggggtgtcagtttgggaaatgtgaaaattgcattgcacaat
aatcctcgattcacaaccatcagttctggggatttggtctatctgctcccagatatgagg
gaaaactcttccatgggtgtttcaaaagtgtttcttgcatggtctcctgaacatgacagc
tttaaagtgcatagtgcctgtagctgcacacttatgaaaagctcgagcaaggaatccgac
ttcaagagacttgttacagactgcattggccttttatccaccatagatcctcctgatatc
tgtggattctcttcaactggatgtggagacctccttctccttctcagcactggttgggta
tgcattatgaagagggacagctgtcttcgtaacatatacaaacttcctgataactgccta
agtgctagtgggtcccaaaataatagcctgaatatatataacgaaatcctggcactaaca
ataggcaggaccctcttcttaatcgacactaaatgtggtttggaattagaaagaataagt
ctaaaaacagaaggtcttctcttcgtaaacactttggatagtcactctccacaaatgctg
tcagaaaccgggctgtttgtggtcacacaaaacccgaagatttcttcaaccctttctgaa
gactcgagtgcactcttggttgaggctgtctttgaggaggcatgtaaatactatcagcaa
agaagtctaagtagcacgcagctcacagtggagaagctcaaaaaaggtgggatgtttcaa
gcgcccatatcgctggctgccatcctcagggattacctcagcaaccagaagaccaaaact
ggcgagaaacattccacaggtcaagaaaggctcatgagctcactcgaatcggaactcagg
agtcttgttttgctggaggacatcaaaacatcaatggtgacggcttcggagaaagatcta
gataattattgtgaaagcttggtgcagcaggagatctgccggctgcttagtggtgagcta
gagagggagaatcttcagtacctgaacggcatcttccatctctttcccacttactcatgg
cacgccattcaagtggttctgcatctgaggtgcagcggtgagggtttgttgtcatctaaa
gctcctgctgatttatggaaaatcatcctcagccctgtgcaacccacagcgaactttgct
cactgcaacggtcagcagaaacacactgtggtgcctgtgtttgagctcttgtgccactcc
atcttcaaattccagcccagctggctccccagatttcttgaactggcacaacaacaatcc
ggcgggtcctccaagtcttcgtggggttacggcatgaaggagagctctgagagcatgccg
ctctataaacgggccatgacggtgctcccttgcaatgggacctaccaacaacttgaagtg
gagttgcttttgtgcagtgagcgccctaaagcaataatgcaagcgttgcggattctcatc
aagcaaggccagtgggtacaggttgcacaagtagctgagaggttctgccggcagagcccg
cttctgaacaaagagattttcagtgctctgctgtgcgaagtgtcccagcatcgagacctg
gacccttatttagacctgctgtggactctttgtccggaggacatgactgtgacgagcata
cttaatattgtattgaaaaacctgcctgattcgacacagaactcaggacctttcgaggct
cacggcagccaggtaaccatcgggcttttgaaaccactgctcagaaaagttctccaaagg
gagaccaaaccgagccaaaggtacgcagatatccttcagtcacccacagttcctccgctc
actcctccacgccagccgaagggactattcagagatgctgagcagaaggaaaccaagcag
aggacttcctctggatctcaagcgacatgtcaagccagactggtctga
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