KEGG   Cyprinus carpio (common carp): 109112543
Entry
109112543         CDS       T05134                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04145  Phagosome
ccar04514  Cell adhesion molecules
ccar04672  Intestinal immune network for IgA production
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109112543
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109112543
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109112543
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109112543
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109112543
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109112543
  Exosomal proteins of epithelial cells
   109112543
  Exosomal proteins of breast milk
   109112543
SSDB
Motif
Pfam: C1-set C2-set_2 MHC_II_beta Ig_3 C2-set_3 Ig_2 DUF1687 Cna_B
Other DBs
NCBI-GeneID: 109112543
NCBI-ProteinID: XP_042576945
UniProt: A0A9R1SKX1
LinkDB
Position
B3:complement(40676055..40678787)
AA seq 251 aa
MSLLQYLSCHLILTLSVLTGAKSADDYYIRRSRCIYSSPDFSDMVYIDSFYLNKFLFTQF
NSTLRKFVGFSEIGMRVAEGWNNSPFLLTERAGVTVCKFIFKTEDTPDLIKVVKPKVKLS
SVTQAGGRHPAVLMCSAYEFYPPHIKVSWLRDGKPVTSEVTSTMEMADGDWYYQIHSELE
YTPKSGEKISCMVEHASFNKPMIYDWDPSLLEYERNKVAIGASGLVLGIIITATGLIYFK
KKSTGRALVPQ
NT seq 756 nt   +upstreamnt  +downstreamnt
atgtcactgctacagtacttgagttgtcatctcatcttgacactgtctgtattgactgga
gcaaaaagtgctgatgactattacataagacggtcaagatgtatctacagctctcctgat
ttcagtgacatggtgtatattgacagtttttatttaaataaatttctattcacacagttc
aacagtactttgaggaagtttgtggggtttagcgagatcggaatgagagttgcagaggga
tggaataatagcccctttttgctaacagagagagctggtgttactgtatgcaaatttatt
tttaaaaccgaggacacacctgaccttattaaagtagtgaaaccaaaagttaagctcagt
tcagtgacacaggctggtggcagacatccagctgtgttaatgtgcagcgcatatgaattt
tatcctccgcacatcaaagtttcctggctgagagatggtaaaccagtgacctctgaagtg
acctccactatggagatggctgatggtgattggtactaccaaattcactctgagctggag
tacactcccaaatctggagagaagatctcctgtatggttgagcatgctagcttcaataaa
cccatgatctatgactgggatccgtctctccttgagtatgagaggaataaagttgctatt
ggagcctctggtctggtgctgggaatcatcatcacagctactggactcatttacttcaag
aagaaatcaacaggaagggccctagtacctcagtaa

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