Cyprinus carpio (common carp): 109112702
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Entry
109112702 CDS
T05134
Name
(RefSeq) tumor necrosis factor-like
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04060
Cytokine-cytokine receptor interaction
ccar04150
mTOR signaling pathway
ccar04210
Apoptosis
ccar04217
Necroptosis
ccar04350
TGF-beta signaling pathway
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04625
C-type lectin receptor signaling pathway
ccar04920
Adipocytokine signaling pathway
ccar05132
Salmonella infection
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109112702
04350 TGF-beta signaling pathway
109112702
04150 mTOR signaling pathway
109112702
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
109112702
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
109112702
04217 Necroptosis
109112702
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109112702
04621 NOD-like receptor signaling pathway
109112702
04622 RIG-I-like receptor signaling pathway
109112702
04625 C-type lectin receptor signaling pathway
109112702
09152 Endocrine system
04920 Adipocytokine signaling pathway
109112702
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109112702
09171 Infectious disease: bacterial
05132 Salmonella infection
109112702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccar04052
]
109112702
00536 Glycosaminoglycan binding proteins [BR:
ccar00536
]
109112702
Cytokines and neuropeptides [BR:
ccar04052
]
Cytokines
Tumor necrosis fators
109112702
Glycosaminoglycan binding proteins [BR:
ccar00536
]
Heparan sulfate / Heparin
Cytokines
109112702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
109112702
NCBI-ProteinID:
XP_042633616
Ensembl:
ENSCCRG00000003544
UniProt:
A0A8C1MNA4
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All DBs
Position
A20:13154942..13157414
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AA seq
227 aa
AA seq
DB search
MMMDLESLPLPQEMVSRRNASSSKSGVWRVCGVLLAVALCAATAVCFTLNRNNQEGGNEQ
RLTLRDNLSKENVTSKVAIHLSGAYDPNVSKNNLDWKLNQDGAFVSGGLKLVDREIIIPN
DGIYFIYSQVSFHISCKNDMTEDQEVMHVSHAVLHYSDFFGSYKPLFSAVRSACVRSNTE
DLWYDTIYLGAAFSLRAGDRLRTETTTELLPHVETDNGKTFFGVFAL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggatcttgagagtctgcccttaccacaggagatggtgtcgaggaggaacgcc
agctcctcaaagtcaggagtctggcgggtgtgtggggtcctgctggctgtggcactgtgt
gctgccactgctgtctgcttcacgctcaacaggaacaatcaggaaggtggaaatgagcaa
aggctcacattaagagacaatctttcaaaagaaaatgtcacttccaaggttgccatccat
ttatcaggtgcatatgaccctaacgtgtctaagaacaacctagattggaaactgaaccag
gatggggcttttgtttcaggtggcttgaaattagtggacagagagatcatcattcctaac
gacggcatttacttcatctacagccaggtgtctttccacatcagctgcaagaatgacatg
actgaggaccaggaagtcatgcatgtgagccatgcagtgctccactactctgatttcttc
ggcagctacaagccgcttttcagcgcagtccgctccgcctgtgtgcgttctaacactgaa
gatctgtggtacgacaccatttacctcggtgcggccttcagcctgcgagctggagacaga
ctgcgcaccgaaaccaccacagaactcctgccccacgtcgaaaccgataacggaaagact
ttctttggggtgtttgctttatga
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