Cyprinus carpio (common carp): 109113549 Help Entry 109113549         CDS       T05134                                  Name (RefSeq) thrombospondin-1-like isoform X1   KO K16857   thrombospondin 1 Organism ccar  Cyprinus carpio (common carp) Pathway ccar04115   p53 signaling pathway ccar04145   Phagosome ccar04148   Efferocytosis ccar04350   TGF-beta signaling pathway ccar04510   Focal adhesion ccar04512   ECM-receptor interaction ccar04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ccar00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     109113549   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     109113549  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     109113549    04148 Efferocytosis     109113549   09143 Cell growth and death    04115 p53 signaling pathway     109113549   09144 Cellular community - eukaryotes    04510 Focal adhesion     109113549   09142 Cell motility    04820 Cytoskeleton in muscle cells     109113549  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccar04131]     109113549   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccar00536]     109113549 Membrane trafficking [BR:ccar04131]  Endocytosis   Phagocytosis    Opsonins     109113549 Glycosaminoglycan binding proteins [BR:ccar00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    109113549 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF Zn_ribbon_NUD TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  109113549 NCBI-ProteinID:  XP_042603413 Ensembl:  ENSCCRG00000029486 UniProt:  A0A8C2FDI7 LinkDB All DBs Position B20:complement(16910593..16921311) Genome browser AA seq 1171 aa AA seqDB search MKSAAIFLLLMLWSCESARVAESRDDNSVYDLFELVQVQKKNHGVTLVKGDDPYSPAYKI LNPDLIPPVPESAFRDLIDSIHAERGFLLLLNFKQFKHTRGSLLTVEKKDGSGPVFEIIS NGKANTLDIVFSTENKQQVVSIEEADLAVGHWKNITLFVQEDRVQFYVGCEEVNTAELDA SIQTILTQETPGVASLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCKNTIMTDII TLDNPINGSRPAIRTDYTGHKTKDLQMICGFSCEDLAAMFKELKGLGVVVQELSNELRKV TDEKNVLMNSMGIHAGVCLHNGIVHKNKEEWTVDDCTECTCQNSATLCRKISCPLIPCAN ATVPDGECCPRCGTPSDSAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQ TRDCYLQECDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQMEGKECQGEGR QTERCEKSPCPISGGWGPWSPWDTCSATCGGGVQNRKRLCNNPVPMYGGKDCVGNTKGSQ ICNKQACPIDGCLSNPCFEGAQCTSFPDGSWKCGKCPTGYTGNGINCKDINECKEVPDAC FEFNGVHRCENTVPGYNCLPCPSRYTGPQPFGQGVEDAASKKQVCTPRNPCLDGSHDCNK NARCNYLGHFSDPMYRCECKPGFAGNGLICGEDTDLDGWPNADLVCVENATYHCKKDNCP NLPNSGQEDYDKDGVGDACDNDDDDDGIPDDRDNCPLIFNPRQYDYDRDDVGDRCDNCPY NSNPDQTDTDNNGEGDACAVDIDGDGILNENDNCPYLYNTDQKDTDLDGVGDQCDNCPLE HNPDQVDSDSDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNSNQADHDKDGKGDACDYDDD NDGIPDDKDNCRLVPNKDQLDSDGDGRGDACKDDFDQDNVLDIYDVCPENFDISETDFRK FQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQITQTYWSSTPTKAQGYSGLSIKVVNSTTGPGEHLRNA LWHTGDTPGQVRTLWHDPKNVGWKDFTAYRWHLTHRPRTGHIRVVMYEGKKIMADSGRIY DKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atgaagtcagctgcaatctttttgctactgatgctttggagctgcgagagcgcgagagtc gcagaaagtcgagacgacaacagcgtttacgatctgtttgagctcgtccaagtgcagaag aaaaaccacggggtgactctggtgaaaggcgacgatccgtacagccccgcctacaagatc ctgaaccccgacctgattcccccggttcccgagagcgccttcagggacctgatcgactcc atccacgcggagagaggatttctgcttctgctcaacttcaaacagttcaaacacacaaga ggaagccttctgaccgtggagaagaaagatggctccggacccgttttcgaaatcatttcc aacgggaaagccaatactctggacattgttttttccactgaaaacaagcaacaggtcgtg tccattgaggaagcggatttggctgtgggacattggaaaaacatcacgcttttcgtgcag gaggacagggttcagttctatgtgggatgcgaggaggtgaatacagcggagctcgatgct tctatccagactatcctcactcaggagaccccgggcgtggcgagcctgaggatcggcaag ggcgcagtgaaggacaggttcatgggggtgttgcaaaacgtgcgctttgtgtttggtacc acactggaggcaattctgaggaataaaggatgcaaaaacacaattatgactgatatcatc acccttgacaatcccataaatggatccagacctgcaatcaggactgattacactggccac aaaacaaaagatctgcagatgatttgtggcttttcatgtgaggacctggctgccatgttc aaggaactgaaaggtcttggtgtggtggtgcaagagctgtccaatgaactccgcaaagtg acggacgagaaaaacgtgctcatgaatagcatgggcattcatgctggtgtctgtcttcac aatggaattgtgcacaaaaataaggaggaatggacagtggacgattgcacagagtgcact tgccagaactctgcaacgttgtgccgcaagatttcatgccccctaatcccatgtgcaaac gccacagtgcctgatggagagtgctgccctcgatgtggaaccccgagcgactccgctgag gatggctggtccccctggtctgaatggacccattgttctgtgtcctgtggaaggggcatt cagcagcgcggccgctcctgtgaccgcatcaataacaactgcgaaggcacatcggtgcag acgagagactgctaccttcaggagtgtgacaagcgctttaagcaggatggcagctggagt cactggtcaccctggtcttcttgctcggtcacctgtggtgctggtgttatcacacgcatc cgtctctgcaactccccaacacctcaaatggaaggcaaagaatgccagggtgaaggtcgg caaactgaaaggtgtgagaaatcaccatgtccgatcagtggtggctggggaccatggtca ccctgggatacttgctctgccacctgtggtggtggagtccaaaaccgtaaacgtctttgc aataatccagtacccatgtatggtggcaaagactgtgtgggaaacacaaagggcagccag atttgcaacaaacaagcctgtccaattgatggatgcctttcaaatccatgctttgaagga gcccagtgtacaagcttcccagatggctcttggaaatgtggaaaatgccccacaggatac actggcaatggaatcaactgcaaggatatcaatgagtgtaaggaagtccctgatgcctgc tttgaatttaatggagtccacaggtgtgagaacacagtgccaggctacaactgcctgcct tgcccctcacgctacactggcccacagccgtttggtcaaggagtggaggacgctgcttcc aagaaacaggtctgcacgcctcgtaatccctgcctcgatggaagccacgactgcaataag aacgctcgctgcaactacctgggccatttctcagacccaatgtaccgctgtgagtgcaaa cctggctttgctggaaatggactgatctgtggagaggacactgatcttgatggctggcct aatgctgatcttgtgtgtgtcgagaatgcaacctatcactgcaagaaggacaactgcccc aatcttcctaactctgggcaagaggactatgacaaggatggagttggtgatgcttgtgat aatgatgatgacgacgatggcattcctgatgacagggacaactgcccactcatcttcaac ccaagacagtacgactacgatcgcgatgacgtgggagaccgctgcgacaactgtccctac aacagcaacccagaccagactgacactgacaacaatggtgaaggtgacgcctgtgctgtg gacattgatggagatggtattttgaatgagaacgacaactgcccatatctgtacaacact gaccagaaagacaccgatctcgatggagttggtgaccagtgtgacaactgccctctggag cacaacccagaccaggtcgactccgattctgaccgtgttggagacaaatgtgacagcaac caggatatcgatgaggatggtcaccaaaacaacctggacaactgcccgtacatccccaat tctaaccaggctgatcacgacaaggatggtaaaggagatgcttgcgactacgatgatgat aatgacggcatccctgatgacaaagacaactgcagattggttcccaataaagatcaactg gattctgatggcgatggacgtggtgacgcctgtaaagatgactttgaccaagacaatgtc ctggatatctatgatgtctgtcctgagaactttgacatcagtgaaacagacttccgcaaa ttccagatggttcctctggatcccaagggcacttctcagatcgaccccaactgggtggtt cggcaccaaggaaaagaactggttcagacagtcaactgcgaccctggcattgctgttggt tttgatgagttcaattcagtcgacttcagtggaacgttcttcatcaacactgaaagggat gatgactacgccggcttcgtttttggataccagtccagctctcgcttctacgtggtcatg tggaagcagatcacacagacctactggtccagcacacctaccaaggcacagggttactca gggctgtcaatcaaagtggttaactccaccacagggccaggtgagcatctgaggaatgcc ctgtggcacaccggagatactccaggacaggttcgcacactgtggcacgacccaaagaat gtgggatggaaggacttcactgcttacagatggcacttgactcatcgaccaagaactgga cacataagagtggtcatgtatgaaggcaaaaagatcatggcagattctggaagaatttat gacaaaacctatgcaggcggaagactaggtctctttgttttctcacaagagatggtgtac ttctcagacctcaaatatgaatgcagagatgcgtaa

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