Cyprinus carpio (common carp): 122139157
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Entry
122139157 CDS
T05134
Symbol
snu13b
Name
(RefSeq) SNU13 homolog, small nuclear ribonucleoprotein b (U4/U6.U5)
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03008
Ribosome biogenesis in eukaryotes
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122139157 (snu13b)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122139157 (snu13b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
122139157 (snu13b)
03009 Ribosome biogenesis [BR:
ccar03009
]
122139157 (snu13b)
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122139157 (snu13b)
Ribosome biogenesis [BR:
ccar03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
122139157 (snu13b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
122139157
NCBI-ProteinID:
XP_042591040
UniProt:
A0A8C1KNY4
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All DBs
Position
B12:complement(6684990..6687492)
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AA seq
128 aa
AA seq
DB search
MTEAEVNPKAYPLADATLSKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSVQ
MAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccgaagtgaacccgaaagcctatcctctggcagacgccacgctctccaaa
accatcctggacctggtgcagcaggcctcgaactacaaacagctaagaaaaggggctaat
gaagccaccaaaactcttaaccgtgggatttctgagttcattgtgatggcggctgatgct
gaacctctggagatcatcctgcacctgccgctgctgtgtgaggataagaacgtgccgtat
gtgttcgtgcgctctaaacaagctctcggacgtgcatgtggagtgtcaagacctgtcatt
gccacatcagtcaccatcaaggagggatcgcagctgaaacctcagattcagtctgtgcag
atggctattgaaagactcctagtttga
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