Ceratitis capitata (Mediterranean fruit fly): 101461197
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Entry
101461197 CDS
T07533
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ccat
Ceratitis capitata (Mediterranean fruit fly)
Pathway
ccat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101461197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccat03041
]
101461197
Spliceosome [BR:
ccat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101461197
Complex C
U5 SnRNP specific factors
101461197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Roc
Septin
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
101461197
NCBI-ProteinID:
XP_004523060
UniProt:
A0A811U9M5
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDSDLYDEFGNYIGPELDSDEDDDQSIYGQQEPQDDQDEDAMDEEEEHQDDEDKEVTAVV
LHEDKRYYPTAVEVYGPDVETIVQEEDAQPLDKPLIEPIKKLKFQIKEQELPETTYDMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFEQAEERTLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSFLMNVFDTPGHVNFSDEVTAAMRMCDGIVLFVDAAEGVMLN
TERLLKHAVQEKMAITVCINKIDRLVLELKLPPQDAYFKLKHIVEEINALLSTYGNGNEN
LLVSPALGNVCFASSLYGFCFTLKSFAKLYADTYDGVNYAEFAKRLWGDMYFHSKSRKFT
KKPPHNSAQRSFVEFILEPMYKVIAQVVGDVDTTLSDTLAELNVRITKEEMKSNIRPLLR
LVCNRFMGDFNGFVEMCVEHISSPLENAKRKVDHIYTGPKEGEIYRDMVDCNQNGTLMVH
SAKMYPTDDCTFFQVMARVLSGTLHAGQEVRVLGENYTLQDEEDSRVLQVGRLWVYEARY
KVELNRVPAGNWVLIEGIDQCIVKTSSIVDINAPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKANKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENEVVSINWNKKRLGEF
FQVNYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKNLLTSVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDAVIAGEALHRGGGQVIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIVIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLLNYPL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggattctgatttatatgacgaatttggcaactacattggtcctgaactggatagtgac
gaagatgatgaccaaagtatatacggtcaacaagaacctcaggatgatcaagatgaagat
gcgatggacgaagaggaagaacatcaagacgatgaagataaagaggttacagccgttgtt
ttacatgaagataaacgttattatccaactgcagtcgaagtgtatggacccgatgttgag
accattgtgcaagaagaggatgcccaacccttagacaaaccgctcattgagcccattaag
aaacttaaatttcaaataaaagagcaggaactcccagaaaccacgtatgacatggaattc
atggctgacctgatggacacaccaccactcatacgaaacgttgcattagtgggacatctc
catcacgggaaaaccacttttgtagactgcttaatacgtcagactcatccacaatttgag
caagcggaagagcgcacactccgctatactgatacactattcactgaacaggagcgtggt
tgtagtattaaggctacacctgtgacgctagtcttacaagatgttaaacaaaagagtttt
ttaatgaacgtttttgatacaccagggcatgtaaacttttctgatgaagtgacagctgct
atgcgtatgtgtgatggtatcgttctttttgtggacgctgcggagggtgtaatgttaaat
actgaacgtttattaaagcatgcggtacaggagaaaatggcaattacggtttgcattaat
aagattgatcgtttagttttggagttgaaattaccgccacaagatgcgtatttcaaatta
aaacatattgttgaggagataaatgctttgctgagcacctatggtaatggtaacgagaac
ttattagtttcacctgctttaggcaacgtttgctttgctagttcattatacggattctgt
ttcactttaaaatcgttcgctaaactgtatgcagacacttatgatggcgttaactatgca
gaattcgccaaacggttgtggggcgatatgtacttccatagtaaatcgcgaaaatttacg
aaaaagccacctcataactcagcacagcgtagctttgtcgaatttattttggaacccatg
tataaagtgattgctcaagttgttggtgatgttgatactactctttcagatactctggct
gagctaaatgtacgtataaccaaagaggaaatgaagtctaatatccgtcctctgttacgt
cttgtatgcaatcgctttatgggagattttaatggatttgttgaaatgtgtgtggagcac
ataagctcacccttggaaaatgctaagcgaaaagtagatcacatttacacgggaccaaag
gaaggtgaaatttatagagatatggtggactgcaatcagaatggcaccttaatggtccat
agcgctaaaatgtaccccaccgatgactgtacatttttccaggttatggcgcgtgtactc
tcgggaactttgcacgcaggtcaagaagtacgagttttgggtgaaaattacactctgcaa
gatgaagaagattcccgggttctgcaagtgggtcgcttgtgggtatatgaagcccgctac
aaagtggaactgaatcgagtgccggccggtaattgggtacttattgagggtatcgatcag
tgtattgtgaagacttcatcaattgttgacataaatgcaccagaagatctctatattttc
cggccactaaaattcaatacgcagagtattataaaaattgcagtagaacctgtaaacccc
tcggagttgccaaagatgttggatggtttacgtaaagctaacaaatcctatcctctacta
tcaacaagagtagaagaatctggtgaacatgtaattttaggaactggagaactttattta
gattgtgttatgcacgatttacgtaaaatgtattctgaaatcgacatcaaagttgctgat
cctgttgtcgccttttgcgaaactgttgtggagactagttcattgaaatgttttgctgaa
acaccaaataagaaaaacaaaataacaatgatttcagagccgttagagaaaggtcttgct
gaggacattgaaaatgaagtggtatcaattaattggaacaaaaagcggcttggagagttc
ttccaagtcaactacgattgggatttactggcagctcgttcaatttgggctttcggtcca
gatacaaccggaccaaatattctcgtagacgataccctaccatcagaagtagacaaaaat
ttactcacttcagtgaaagactcaatagtgcaaggtttccaatggggtacacgagaggga
ccactgtgtgaggaaccaattcgtaatgtaaaatttaaaatattggacgctgtaatcgct
ggcgaagccttacatcgtggtggtggtcaagtaatacccaccgcgcgtcgtgttgcttac
tcagcattccttatggctacaccacgcttgatggagccttatttatttgtagaagtacaa
gcgccagccgattgtgtttcagccgtgtacacagtgttagcgagacgaagagggcatgta
acacaagatgctccagtttctggttcacccttatacaccattaaagcgtttatacctgcc
attgattcgtttggcttcgagacagatttacgtacgcatacacaaggacaagccttttgc
ttatccgtatttcatcattggcaaattgtgcccggcgatccgttggataagtctatagta
ataagaccactggaacctcaacaagcttcacatctggcacgtgaatttatgattaaaaca
agacgtcgcaaaggcttgtcggaagatgtctccattaataagttcttcgatgaccctatg
ttgttggagttggcgagacaagatgtgcttttgaattatccactgtag
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integrated database retrieval system
