Cynara cardunculus var. scolymus (artichoke): 112501047
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Entry
112501047 CDS
T05604
Name
(RefSeq) probable DNA helicase MCM9 isoform X1
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccav03032
]
112501047
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112501047
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112501047
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
112501047
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112501047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
MCM_N
AAA_5
AAA
AAA_22
DUF7129
Zn_ribbon_8
HypA
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
112501047
NCBI-ProteinID:
XP_024960454
LinkDB
All DBs
Position
LG 17:complement(6726036..6758835)
Genome browser
AA seq
675 aa
AA seq
DB search
MELYDNRPEKILTDFLTEYYSDQLHSILLSSDLRLHYPLYVDFAEVLEHDSPLSHEILFE
PTKYLRIFDESAKLAQEIMFGQAKKVWEHERQKEDLERPPPSIKEFVHVRIEIHGPMLDN
PELCPSIGRVRVKHRGILLTLKGTVIRSGSIKMIDGEREYECRKCKHRFKVHPELESRNS
IPKPISCPSKKPYCESTSFQLLEGGKICHDYQEIKIQESTQVLGVGAIPRSVPVILQDDL
VDIVKAGDDVIVTGVLTAKWSPELKDVRCDLEPVFVANYVRRINEVKLDIEIPDDIVWKF
KTFWSDFKDTPLNGRNAILRAICPQVYGLFTVKLAVALTLIGGVQHVDGSGTKVRGESHL
LLVGDPGTGKSQFLKFAAKLSKRSVITTGLGSSSAGLTVTAVKDGGEWMLEAGALVLADG
GLCCIDEFDSFLFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGRY
DPEQSLSINTTLSGPLISRFDIVLVLLDTKNPDWDKVVSDHILDQAEPEKDKCHEDLGKM
WPLSMLRRYIHFVKGYFRPTLTKEAESVISRYYQLQRRTGKENAARTTVRMLESLIRLAQ
AHARLMFRNEVTRLDAITAILCIESSMTTSAIVDSAGNALHSNFTDNPDQQYVMQEKQIL
AKLNSPDEFPDAITL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtacgacaaccggccagagaaaattctgacggatttcttgacggaatattac
tccgatcagcttcactccatcctcctctcctccgatcttcgtcttcactatcccctctat
gtggactttgctgaagtgttggagcacgattctccactttcccatgagatccttttcgaa
ccgaccaagtacttgcgtatattcgatgaatctgccaaattggctcaggagatcatgttt
ggacaggctaagaaagtttgggagcatgaacgtcagaaggaagatttggagcgtccacct
ccaagtattaaggaatttgtgcatgttcggattgaaatccacggtcccatgcttgataat
cctgagttatgtccgagcattggacgtgttcgtgtgaagcatcgtggcattcttctcact
ctgaagggaacggtaattaggtctggatcaattaagatgatagacggggagagggaatac
gaatgtcggaaatgtaaacacaggtttaaagttcatcctgaactggaaagccggaattcc
ataccgaagccaatatcttgcccttccaagaaaccctactgcgaaagcaccagttttcag
ctcctagaaggcggcaaaatttgtcatgattaccaggagataaaaatccaagaaagcact
caggttttaggcgttggggcaatcccacgctcagttcccgttattttgcaggatgatctc
gttgacattgttaaagctggagatgatgtgattgtaacaggagttttgacagctaaatgg
tctccagaactgaaggatgttcgttgtgaccttgaacctgtatttgttgctaattacgtg
agacgaataaatgaagtaaagttggatatagaaatccctgatgacattgtttggaaattc
aaaacgttttggtcagatttcaaagacactccattaaatggtagaaacgctattcttagg
gctatttgccctcaagtttatggtctcttcactgtgaagctagcagttgccttgacactt
attggaggagtacaacatgttgatggttctgggacaaaagtacgaggcgagtcccatctt
cttcttgttggcgatccaggtacaggaaagtcccagtttttgaaatttgctgctaagttg
agcaaaagatctgtaattactactgggttgggaagcagtagtgctggattaaccgtcact
gcagtcaaggatggaggtgaatggatgctagaagctggagctcttgtcttagctgatggt
ggactttgctgcattgatgaatttgatagctttttgtttgacagcatgagggaacatgat
agagcgactatacatgaggcaatggagcagcagacaataagtgtggctaaggcgggtctt
gtaactactctcagtacaagaactatagtctttggtgccacaaatccaaaaggccgctat
gatcctgagcaatctctgtccatcaacaccactttatctgggcctttaataagcagattt
gacatagtcctggttctcttggacacaaagaatccagactgggataaagttgtctcagat
catattcttgatcaggcagaaccagagaaggacaaatgtcatgaagatctcggtaaaatg
tggcccctttccatgctcaggaggtatattcactttgtaaaagggtattttaggccaact
ctgactaaagaggcagaaagtgttatctcaagatattatcaactccaaagaagaacagga
aaagaaaatgcagcaaggaccactgtccgaatgctcgagagtttaatccgacttgctcaa
gcacatgcaagattgatgttcagaaatgaagtcacacgattagatgccatcacagcgatt
ctatgcatcgagtcatccatgacaacatcagctattgttgatagtgctgggaatgcgttg
cactcgaattttactgataaccctgatcaacaatatgtgatgcaagaaaagcagatcctt
gcgaagctgaactctcccgatgaattcccggatgcaattactttatga
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