Cynara cardunculus var. scolymus (artichoke): 112505767
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Entry
112505767 CDS
T05604
Name
(RefSeq) ataxin-3 homolog
KO
K11863
Ataxin-3 [EC:3.4.22.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112505767
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccav01002
]
112505767
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112505767
Peptidases and inhibitors [BR:
ccav01002
]
Cysteine peptidases
Family C86
112505767
Ubiquitin system [BR:
ccav04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
112505767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
UIM_2
UIM
USP_UIM_N
Motif
Other DBs
NCBI-GeneID:
112505767
NCBI-ProteinID:
XP_024965508
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All DBs
Position
LG 2:15828395..15845606
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AA seq
316 aa
AA seq
DB search
MEGPINGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRREHQMMLEGPAA
SGGDAFLSEESYNVSMDGDFSIQVLQKALXVWDLQVIPLHSPVAEPAQVDPELENAFICH
LQDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDTLKGFGWSIFLVRGNFPKECPM
TSGEASNGYGQWLLPEDAERITKSCNSGQRQQQQTQQLQPQRTPPMEDDDLNAAIAASLR
DNSGEVGTSGNDDDLEAAIAASLKDSSPAVTTSLVNKDLDAAAPVATADTTAVTGAASGE
GGTSESESMKIGLQDK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtccgatcaacggaggaatgttgtaccacgaggtacaagagtcgaagctgtgt
gccgtccattgcgtcaacacggtgttgcagggacctttcttctccgagttcgatttggct
gctcttgcctccgatcttgatcggagggagcatcagatgatgcttgaaggtcctgctgct
tcaggaggagatgctttcttgtctgaggagtcgtataatgtctctatggatggcgatttc
agtatccaggtgctacagaaggcattggakgtgtgggacctacaagttatccccctgcac
agtccagtagccgagccggctcaggttgacccagaacttgagaacgcatttatatgccat
ttacaagaccattggttctgcatcaggaaggtgaacggagaatggtacaactttgacagc
ttatacgcagcccctgaacatctctccaaattctatctttctgcttatctcgacacttta
aaaggtttcggatggagtatctttctggtcaggggtaacttcccaaaagaatgtccgatg
acatctggtgaagcctccaatggttatggccagtggttgttgcctgaagatgctgagcga
attaccaaatcctgcaattcaggacagcggcagcaacagcaaacgcagcagttgcagcct
caaagaactccaccgatggaagatgatgacctgaatgccgccattgctgccagtttgaga
gataacagtggtgaagttgggacctccgggaatgacgatgatctggaggcagccatagcc
gccagcttgaaggattcttcaccagcggtaacaaccagcttggtgaacaaagatttggat
gctgcagcaccggttgccaccgctgatactacagcagtcacaggtgccgccagtggtgaa
ggcggcacgtcggaaagtgaaagtatgaagatcggattacaagataagtga
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