Cynara cardunculus var. scolymus (artichoke): 112506706
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Entry
112506706 CDS
T05604
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112506706
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112506706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112506706
03009 Ribosome biogenesis [BR:
ccav03009
]
112506706
Spliceosome [BR:
ccav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112506706
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
112506706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
112506706
NCBI-ProteinID:
XP_024966714
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All DBs
Position
LG 2:complement(11791857..11794231)
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AA seq
128 aa
AA seq
DB search
MTGEAVNPKAYPLADAQLSITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADA
EPLEIILHLPLLAEDKNVPYVFVPSKQALGRACGVTRSVIACSVTSNEGSQLRSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaagcagttaatcccaaagcatacccattggctgatgcccagctttcaatt
acaatcttggatcttgttcaacaagctgctaattacaaacaactcaaaaaaggtgccaac
gaagctacaaagaccctgaacaggggtatatctgagttcgtagtgatggcagctgatgct
gagccccttgaaattatcctccatcttcctctgcttgctgaagataagaatgtaccctac
gttttcgttccctcaaagcaagctcttgggcgagcatgtggagtcacaagatctgtcatt
gcatgttcagttacctctaacgaaggaagtcaattaagatcccaaatacagcagcttaag
gatgccattgagaagctcttgatctaa
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