Cynara cardunculus var. scolymus (artichoke): 112506938
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Entry
112506938 CDS
T05604
Name
(RefSeq) transcription factor PCL1-like
KO
K28173
GARP family transcription factor, LUX subfamily
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112506938
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
112506938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
112506938
NCBI-ProteinID:
XP_024967042
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All DBs
Position
LG_2
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AA seq
310 aa
AA seq
DB search
MGDEVRISDYDVGGADDDGRVLEWEVGLPNVNDLPSLSQLLISAELAYAFSITPETHRSM
NDVDRASRDTLASLRGQSQHLMNKINDLNSFSDDRGEEMVVEGEETLDLTREGSDSRKLR
RVDSGGAVGGAGEADDSSTKTSKRTRLVWTPQLHKRFVEVVARLGVKNAVPKTIMQLMNV
EGLTRENVASHLQKYRLYVKRMQGLSDEGSSPSDHLFASTPVPKGLHDSGGGGGNGSGMP
YPPQLVPMPYPPPQMVPNPASGGGRAYHHHGFESHSHPYNYNIMMQPRDWSGNNFGSISA
YQHRMTSNDE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgaagtgagaatttccgactatgatgtcggcggtgcagatgacgacggccga
gttttggagtgggaggttgggttgcccaacgtcaacgatttgccgtcgttgtcacagttg
ctgatatcggcggaactggcatatgctttcagcatcacgccggagactcaccggagtatg
aatgacgtcgatcgcgcttctcgcgacacactcgcgagtctccgagggcagtcgcagcat
ctgatgaataaaattaatgatttaaactcgtttagtgatgatagaggagaagagatggtt
gtggaaggcgaggagaccttggatctgactcgagagggttcggattcgaggaaattacgg
agagttgatagtggcggtgccgttggtggcgctggagaagcagatgattcttcgaccaag
acatcgaaacggactcgtttggtttggacaccgcaattgcacaagcggtttgttgaggtt
gttgcgcgtttaggggtgaagaacgcggttcctaaaacgattatgcagttgatgaacgtt
gaaggtttgacgagagagaacgtcgccagtcaccttcagaagtataggttgtatgtaaaa
aggatgcaggggttatctgacgaagggtcgtcgccttcggatcacttgttcgcttcaact
cctgttcctaagggtttgcacgattccggtggcggtggtggaaatggaagtggaatgccc
tatccaccacagctggtgcctatgccctacccaccaccgcagatggtccctaatccggca
agtggtggcggccgtgcttatcatcatcacggtttcgagtcacattcacatccatataat
tataatattatgatgcagccaagagactggtctggaaacaattttggttcaatttcagcg
tatcagcaccgtatgacttctaacgatgaatag
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