Cynara cardunculus var. scolymus (artichoke): 112508463
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Entry
112508463 CDS
T05604
Name
(RefSeq) phenylalanine ammonia-lyase-like
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00360
Phenylalanine metabolism
ccav00940
Phenylpropanoid biosynthesis
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
ccav_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
112508463
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
112508463
Enzymes [BR:
ccav01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
112508463
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Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
VAD1-2
Motif
Other DBs
NCBI-GeneID:
112508463
NCBI-ProteinID:
XP_024968844
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All DBs
Position
LG 3:complement(16178417..16183451)
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AA seq
706 aa
AA seq
DB search
MDQCTNGHANINHDXTDPLNWGVAAAALSGSHLEEVKRMVGEYRNTVVRLGGETLTIAQV
AAVATTNVQVQLSESARAGVTASSXWVMDSMKKGGDXYGVTTGFGATSHRRTKEGGALQQ
ELIRFLNAGIFGTGAESDHTLPQSTTRAAMLVRINTLLQGYSGIRFEIMEAITKFLNHSI
TPCLPLRGTITASGDLVPLSYIAGILTGRHNXKAVGPAGELLDAVSAFNRAGIXTGFFEL
QPKEGXALVNGTAVGSGLASVVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKH
HPGQIEAAAIMEHILDGSSYVKEAKKIHEMXPLQKPKQDRYALRTSPQWLGPLIEVIRTS
TKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSEL
VNDFYNNGLPSNLSGSRNPSLDYGFKGAEIAMASYCSELQFLANPVTSHVQSAEQHNQDV
NSLGLISSRKTAEAVEIVKLMSSTYLVALCQAVDLRHLEENLKSTVKNVVSQVAKKVLTT
GXNGELHPSRFCEKDLLKVVDREHIFSYIDDACSATYPLMQKLRQVIVEHALANGEAEME
SSTSIFQKIXGFEQELEALLPKEIESTRVDHEGGKLAIXNRIEECRSYPLYKFVRTELGT
GYLTGEXXXSPGEEFEKVFSAICAGKLIDPLLDCLKTWDGKPLPIS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatgtaccaatggacatgccaacatcaatcatgataygacggacccaytgaat
tggggtgtcgctgcggcggcgttaagcggaagccacctggaggaggtgaagagaatggtc
ggggagtatcggaatacagtggtgaggttgggtggcgagacgctgactattgcccaggta
gccgcggtcgccaccaccaacgttcaggttcagctgtcggaatccgctcgtgccggagtt
acagccagcagtgaktgggttatggayagcatgaagaaaggaggagacasctacggtgtc
acmaccggtttcggtgccacctctcaccggagaaccaaggaaggtggtgctcttcaacag
gaactcattagattcttgaacgccggaatctttggtaccggagcggaatcagaccacacg
ctgccgcaatccaccacaagagccgccatgttggtcagaatcaacaccctcctccagggc
tactccggcatccgatttgaaatcatggaagccatcacaaaatttctcaaccacagcatc
accccatgcctacccctccgtggcacaatcacagcctccggcgacctggtcccactatcg
tacattgccggaatcttgaccggccgccacaattscaaggccgttggccccgccggagaa
ttgcttgatgccgtcagtgctttcaatcgtgccggtatckataccggatttttcgagcta
caacctaaagaagggyttgcgttagtgaacgggaccgcggttgggtccggtttggcttct
gtggttctttttgaagctaacatcctcgcggtcttatcggaggttttgtcggccattttt
gccgaagttatgcaaggaaagcctgagtttacagatcatctgacccataaactgaagcat
caccccggccagattgaggctgcggcgatcatggagcacattcttgacggtagctcctac
gtaaaagaagcaaaaaagatacacgaaatggawccgcttcaaaagccgaagcaagatcgt
tacgcccttcgtacatcaccgcaatggcttggtccacttattgaagtgatacggacatcg
acaaaatcgatcgagagagagattaattcggtgaacgataaccccttgatcgacgtttct
agaaacaaggcacttcacggagggaattttcagggtaccccgataggagtgtcgatggac
aatacacggctagccgttgcatccataggaaagctcatgtttgcacagttctccgagctc
gtaaacgacttttacaacaatgggttgccatccaatctctctggaagccgtaatccaagt
ctggattacggtttcaaaggagcagaaattgccatggcgtcctactgttcggaactccag
ttcctcgcaaaccctgtaaccagtcacgtgcaaagcgcagagcaacataaccaagacgtg
aactcgttagggttgatttcttcacggaaaacagccgaagcggtcgagattgtgaaactc
atgtcatcgacttacttggtggcactatgccaagcagtcgacttgaggcacttggaggaa
aacctcaagtcgaccgtcaagaatgtggttagccaggtggcgaagaaagtcttgaccacg
ggymacaacggcgagcttcacccatctcgcttttgcgaaaaggatttgctcaaagtggtc
gaccgtgagcacatcttttcgtacatcgacgatgcgtgtagtgcaacttaccctctaatg
caaaagttacgacaagttatagtcgagcacgcccttgcaaacggtgaggccgaaatggag
tcgagcacgtcaatcttccaaaagatcasgggtttcgagcaagaactcgaagcccttttg
ccgaaagaaatcgaaagcactcgggtcgatcacgaaggtggaaaattggcgatcwttaac
agaatcgaagaatgtcgatcgtacccgttgtataagttygtgaggactgaacttggaacc
ggttatttgaccggcgagawgayggygtcgccsggagaggagtttgaaaaggtgttctcg
gcgatctgtgccggaaaattgatcgatccactgttggattgcttgaagacgtgggatggg
aagccacttcccatttcatga
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