Cynara cardunculus var. scolymus (artichoke): 112512081
Help
Entry
112512081 CDS
T05604
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112512081
Spliceosome [BR:
ccav03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
112512081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PDS5
HEAT_2
Cnd1
INTS4_8HBD
HEAT_EZ
CTK3
Death_3
Motif
Other DBs
NCBI-GeneID:
112512081
NCBI-ProteinID:
XP_024973650
LinkDB
All DBs
Position
LG 5:11438327..11451445
Genome browser
AA seq
936 aa
AA seq
DB search
MEQKLLSSLEQIFRIQTKISLKPFSMARSLILNPSTSDQTISSILQILETLSTATINPKF
DLLNFITLLCEISIVHRHFSPTVTTILRSLCLHCPSIPPRAAGLALSTLVSIAPASASDL
GPAFSEGLFLSLCFGPCVPVRQRLLMDAEKFRVRPSVLLTVLLGFTKDPYPYVRKAALDG
LIDFCKWIVVNDHLMVEGCYLRAVELLFDTEECVRCSAVHVVNEWGNWLVENSEDKSKRD
CSDALYVQLCSMVRDMSKKVRIEAFNTLGKAGMASEYILMQTLSKKVLPTTKEKMFPGQL
SGKLLSLPASSAAGAFIHGLEDEFFEVRSSACYALRMPAVLSADFAAGALGLLMDVLNDD
STVVRLQALETMHHMAVFGHLKVQEMHMHMFLGTLVDMNSSIRFTARKVLRLTKLHDLPL
FKLAADSLIQSLEIYPQDEPDVLSLIFDIGRRHGSFAVSITKEILSEIEPSSESTCDFNS
SKTAARLVLAISAPLSHGKQQQLHSIPSILYSYAVTMLGRISHCLTEVMNQDTLLAYLSY
CSRSTGVNPIDSVKMVEDDLPTETNGRLTCCVRLDMVHMSDGGSEIQSQGLLEPSQIAVP
HVADNCVKFILANIGEIWDMTKLGCISEVLMTLRSWKEELATFITDSHQSDSVLILTLQY
LHLVKLLSKAWWHVTCPINFIYNEMGNLGYILQKLESTLREVRCRFIGLSKEDELHFLEL
MLVACTLRLSIFDASCPESALTKLYSTKSRVMLLYEDCSIEPSRFVSELIKVLQKNDTCD
ISRFRESLEFFSLNQLVFSGSFRYMKAEVDIGDNDWLKPLPFVAGLPVDIPLKIRLHNTP
IETKVWLEMRMSKDLNQYVFVDLKLFDGSDEIREFTFIAPFYRTPKVNSFILRLSVGMEC
LSEEINYFRGHGGPKHELVYLCKEKEVFLSMVVKQC
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaagcttctatcgagtttagaacaaattttcagaattcagacaaagatatct
ttaaaacccttctctatggcaagatctctcatcttaaacccctcaacctccgatcaaacc
atctcctccatcctccaaatcttagaaactctatcaacagctacaataaaccccaaattc
gaccttctcaatttcatcacactcctttgtgaaatctccattgtccaccgccatttctcc
ccaaccgtcaccaccatactccgctcgctctgccttcactgccccagcattcccccacgt
gccgccggacttgcactctctacccttgtttccatcgctcctgcttctgcttccgacttg
ggtcctgcgttttcagagggattgtttttatcgctctgcttcggtccgtgcgtgcctgtg
cgtcaaaggctgttaatggatgcggagaaatttagagtccgaccgtcagttctgctcacg
gtattgctagggttcactaaggacccgtatccttacgtgaggaaggctgctttggatggg
ttgattgatttctgcaaatggattgttgttaacgatcatcttatggttgaaggatgctac
ttgcgtgctgttgagctgttgtttgataccgaggaatgcgtgagatgctcagctgttcat
gtggtaaatgaatggggaaactggcttgtggaaaatagtgaggataaaagcaaaagagat
tgctcagatgcattgtatgtacagctctgttcaatggtgagggacatgagtaagaaagtc
agaatcgaagcttttaatacccttggtaaggcaggaatggcgtccgagtacattttgatg
caaaccctctctaaaaaagtcttaccgaccacgaaagaaaagatgttccctggtcagctc
tcaggaaagcttttaagtttaccagcatcaagtgctgccggagctttcatacatgggttg
gaggatgaattctttgaggtacggagttctgcatgttatgccttgaggatgcctgccgtt
ctttctgccgacttcgctgctggagctttaggtttattgatggatgtgttgaatgatgat
tcaactgttgtcagattacaagctctggagaccatgcatcacatggcagtttttggtcat
ctaaaagtgcaagaaatgcacatgcacatgttccttggcacgctagttgatatgaactca
tccataagatttacagctaggaaagtacttcgattaaccaagctccatgacctgcctctg
tttaaactagctgctgacagcctcatacagagtctagaaatatatccacaggatgagccg
gatgttctctctcttatatttgatattggccgaaggcatggaagttttgctgtcagcatc
actaaggaaattctttcagagattgaaccttcatccgaaagcacttgcgacttcaatagt
tcaaaaactgctgcacgtcttgtattggccatctctgctccactctcccatggaaagcaa
cagcagttgcacagcataccgtcaatattatattcttatgctgttacaatgcttggaaga
atttctcattgcttgactgaagtgatgaaccaggacacacttttggcttatttgtcatat
tgtagtagatcaactggagtcaaccctatagattccgtgaagatggttgaagatgatctg
ccaacagagaccaacggacgactaacctgttgtgtcagattggacatggttcatatgagt
gatggtggttctgaaattcagtcgcagggactccttgaaccaagccaaatagccgttccc
catgtagcagataattgtgtaaagttcatccttgctaatatcggagaaatatgggatatg
acaaagttgggatgcataagtgaagtgcttatgacattgaggagttggaaggaagagcta
gcaacttttatcaccgattcacatcaatccgattccgtattaattcttactttacaatac
ctgcatctggtgaaactgctttcaaaagcatggtggcatgttacatgcccaataaacttt
atatataatgagatggggaacttaggatacattttgcagaagttagagagtactctgaga
gaagtaagatgtaggttcattgggttgagtaaagaagatgagttgcattttcttgagctg
atgcttgttgcttgtacactgagattgtctatttttgatgccagctgtcctgaatctgct
ctcacaaaattatactccacaaagtcacgggtgatgttactttatgaggattgttcaata
gaaccttctagatttgtgagcgaactcattaaagtattgcagaaaaacgatacatgtgat
atctctcggtttcgggagtcgcttgagtttttctccttaaatcaacttgtattctctgga
agctttagatacatgaaagcagaagtggatattggggacaatgactggttaaagccgctt
ccttttgtggcaggactacctgttgatataccgttgaagatcaggctgcataatacaccg
attgagactaaagtgtggctagaaatgagaatgtccaaggacttaaaccagtatgtgttt
gttgacttgaaactgtttgatggttctgatgagattagggaatttacatttatagctccc
ttttatagaacaccaaaagttaattcttttatattaaggttatctgtaggcatggaatgc
ttatctgaggagattaattatttcagaggccatggtgggccaaagcatgagcttgtttac
ctttgcaaggaaaaagaagtcttcctttctatggttgttaagcaatgttaa
DBGET
integrated database retrieval system
