Cynara cardunculus var. scolymus (artichoke): 112513201
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Entry
112513201 CDS
T05604
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112513201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112513201
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112513201
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF5667
Motif
Other DBs
NCBI-GeneID:
112513201
NCBI-ProteinID:
XP_024975152
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Position
LG_5
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AA seq
374 aa
AA seq
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MMNHIVPDFEADEDYLIPEMPKKSTMGGDEDIMELLWQNGQVVMQSQNQRSVGNKKPEIR
TSMANREIRSSVVEEETGPSDLFMQEDEMSSWLHYPMDENSLEGCLYSGSGASASVEPSS
QKPPPTTDDRKRKGRDTDDTECHSEDVEFEYTDAKKQSHGATSTKRSRAAEVHNLSERRR
RDRINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQMQVQMMSMGCSMVPMMFPGVQQ
YMSPMAMGMGMNHAMVPYPSILPGSSLPNPAAAVAAAAATQLGPRFPVPGFNMPPPVTIT
GGPAASQAANLSAPMMSSFPSHNQNQPQAPNFSDPFQQYLGLHPTQIPLPQNQGGMPPIA
TKPSSSKDPTNQSG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcatattgttcctgattttgaagcggacgaggattacttaattccggagatg
cctaagaaatcaacaatgggtggagatgaagatatcatggagctactatggcagaatggt
caggtggtgatgcagagccaaaaccagagatccgtggggaacaagaagccggagattagg
acatcaatggcgaatcgagagatccgatcgtccgttgttgaagaagaaacaggaccttct
gatttgttcatgcaagaagacgagatgtcctcttggcttcattaccctatggatgagaat
tccttagaaggctgtttatacagtggctcaggagcaagcgccagtgtggagccttcgtct
caaaagccgccgccgacaactgatgatcggaagcggaaaggcagagataccgacgacaca
gaatgtcacagtgaggatgtcgagtttgagtataccgatgcaaagaagcaatcgcatggg
gcaacctccaccaagagatcccgtgctgctgaggtccataatctctctgagcggagacgt
cgagataggattaatgaaaagatgaaggccttgcaagaactaataccccgatgcaataag
tctgacaaagcttcaatgctggatgaagcaatcgagtacttgaagtcgcttcaaatgcaa
gtgcagatgatgtcaatgggatgcagcatggttccgatgatgttccctggtgtccagcaa
tacatgtcgccaatggctatgggaatggggatgaaccatgccatggttccatatccctcc
attcttccaggctcatcactacccaatccagcggcggcggtggcggctgcagcggcgact
cagctaggtccacggttcccagttccgggatttaacatgccaccacctgttaccatcacg
ggtggtcctgcagcaagtcaagcagccaatctgtcggctccgatgatgagctcctttcct
tcacataatcaaaaccaaccacaagcccccaatttctcagatccttttcaacagtacctt
ggtctccatccaactcaaataccgcttcctcagaatcaaggaggcatgccccccattgca
actaagccaagcagcagtaaagatcctaccaaccaatctggttga
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