KEGG   Cynara cardunculus var. scolymus (artichoke): 112516390
Entry
112516390         CDS       T05604                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03420  Nucleotide excision repair
ccav04120  Ubiquitin mediated proteolysis
ccav04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    112516390
   04120 Ubiquitin mediated proteolysis
    112516390
  09124 Replication and repair
   03420 Nucleotide excision repair
    112516390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccav04121]
    112516390
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112516390
Enzymes [BR:ccav01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     112516390
Ubiquitin system [BR:ccav04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   112516390
  Multi subunit type E3
   SCF complex
    Ring finger protein
     112516390
   Cul2 complex
     112516390
   Cul3 complex
     112516390
   Cul4 complex
     112516390
   Cul7 complex
     112516390
   Cul8 complex
     112516390
   Cul9 complex
     112516390
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      112516390
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      112516390
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 112516390
NCBI-ProteinID: XP_024979171
LinkDB
Position
LG_8
AA seq 125 aa
MASLDTDVTMVPAGEGSGGAGPSSSTASTSSSTKKAKRFEIKKWNAVSLWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcttctctcgacaccgatgtcaccatggttccagccggtgaaggttcaggcggagcc
ggaccctcatcttccaccgcatccacttcctcttcaactaagaaagctaagcgatttgag
atcaaaaagtggaacgctgtttctctttgggcttgggatattgtcgtggataattgcgca
atttgtaggaatcatatcatggatctctgcatcgaatgtcaggctaaccaagccagtgct
accagtgaggaatgcacagttgcttggggggtctgcaatcatgcatttcactttcactgt
attagcagatggctcaaaactcgtcaagtctgtccattggataatagcgaatgggaattt
cagaagtatggtcactag

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