Cynara cardunculus var. scolymus (artichoke): 112516710
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Entry
112516710 CDS
T05604
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
ccav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112516710
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112516710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccav03041
]
112516710
03009 Ribosome biogenesis [BR:
ccav03009
]
112516710
Spliceosome [BR:
ccav03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
112516710
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
112516710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
112516710
NCBI-ProteinID:
XP_024979682
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Position
LG 8:4340635..4342914
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AA seq
128 aa
AA seq
DB search
MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADA
EPLEIILHLPLLAEDKNVPYVFVPSKQALGRATGVTRPVIACSVTSNEGSQLRSQIQQLK
DAIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagaagctgtgaatccaaaagcgtacccactggctgatgctcagcttacgata
acgatattggatcttgttcaacaagccgctaattacaagcagcttaaaaagggtgctaat
gaagctacaaagacccttaacaggggtatatctgagtttgtagtgatggcagcagatgct
gagcctcttgaaattattcttcatcttcccctccttgctgaagataagaacgtaccatat
gtttttgtgccctcaaagcaagcgctagggcgagcgactggtgtcacaaggcctgtaatt
gcatgttcggtgaccagcaatgaaggcagccaattgaggtctcaaatacagcaactcaag
gatgcgattgagaagcttctgatctag
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