Cynara cardunculus var. scolymus (artichoke): 112519730
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Entry
112519730 CDS
T05604
Name
(RefSeq) sphingosine kinase 2-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00600
Sphingolipid metabolism
ccav01100
Metabolic pathways
ccav04148
Efferocytosis
Module
ccav_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
112519730
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112519730
Enzymes [BR:
ccav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
112519730
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Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Tim54
Motif
Other DBs
NCBI-GeneID:
112519730
NCBI-ProteinID:
XP_024983739
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Position
LG 10:complement(3685101..3697407)
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AA seq
477 aa
AA seq
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MDQQHILCDEVLVNGGKTGLTLSTDGILRWYDHGNVLQCLSVEKEVLGVSMVGQQIEIRS
FVEIDSGGFCFGCSRRSLVRKSFNFEPLSEDSLRNLCEKIQGYIDSLGRPKKLFIFVNPF
GGRKSAFKVFTDDVKPILEDANIEYKLQETKYQLHAKEVSHTLDLTKYDGIICVSGDGIL
VEVVNGLLEREDWQAALKMAIGVIPAGTGNGMIKSLLDSVGQPCTAAYAMLAAIRGHKRS
LDVATIWQGDTRFYSVLMLAWGLIADIDIESEQYRWMGSARMDFYGLQRILRLRRYNGCI
SFVPAPGFEDVGEPSSLGVESMEPLKARQHGYEGPNVELGSLSWRKLNGPFVSIWLHNVP
WGAENTMAAPNAKFDDGYLDLIVMRECPKMALISLMSGLSNGHYVRSPHVLYIKVKAVIL
EPGSRTIDSTKEGIIDSDGEVLARGNGTYRCHLKSLMVYGKMQIVVDRGLATLFTPI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaacatatactctgcgatgaagttctagtaaacggcggcaaaacaggactg
actttgtcaaccgacggcatactccggtggtatgatcacggcaacgtccttcagtgcctg
tccgtcgagaaagaagttctcggagtatcaatggtcggacaacagatcgaaatcaggtca
tttgttgagattgacagtggcggattttgctttggttgtagcagaaggagtttggtaagg
aagagcttcaatttcgagccattgtcggaggattctctaaggaatttgtgcgagaagatt
caaggctacattgactctttaggccggccaaagaagctgtttatatttgttaacccgttt
ggagggaggaaatccgctttcaaggtttttactgatgatgtgaaacctatactcgaggat
gctaatatcgaatataaattacaagaaactaaatatcagcttcatgcgaaagaagtttct
catacattggatcttacaaagtacgatggcattatttgtgtaagcggagacggcatattg
gttgaggttgtcaatggtttgcttgaaagagaagactggcaagcagcactgaagatggct
attggagttatacctgcaggtactggaaatggcatgataaaatctcttctagattcggtt
ggtcagccatgtacagctgcttatgctatgcttgctgcaattcgaggtcataaacgctct
ctagatgtagccacaatttggcaaggggatactagattttatagtgtcttgatgcttgca
tgggggctgatagcagatatagatatcgagtctgagcagtatcggtggatgggaagtgct
cgaatggatttctatggtcttcaacgaattctaagactgcggagatataatggatgtatt
tcttttgtgcctgctcctggctttgaagatgtaggagagccaagcagtttaggtgttgaa
tctatggaacctcttaaggctcggcagcatggttatgagggccctaatgttgaattgggg
agtttaagttggagaaagcttaatggtccatttgtttctatttggcttcataatgttcct
tggggtgctgaaaacaccatggctgcgcccaatgccaagtttgatgatggttatttggac
ttgatcgtaatgcgggagtgcccaaagatggcattgatatccttgatgtcgggattgagc
aatgggcattatgtgagatcaccgcacgtcttgtacattaaggtgaaggccgttatcttg
gagcctggttcaaggacgatagactcaaccaaagaagggatcatagattcagacggggaa
gtcttggcaagaggtaacggaacgtataggtgtcacttaaagtcgttgatggtctacggc
aagatgcaaatcgtcgtagatcgaggtttggctactttgtttacccctatttaa
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