Cynara cardunculus var. scolymus (artichoke): 112521105
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Entry
112521105 CDS
T05604
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112521105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112521105
03036 Chromosome and associated proteins [BR:
ccav03036
]
112521105
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112521105
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
112521105
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
112521105
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
112521105
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
112521105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
112521105
NCBI-ProteinID:
XP_024985553
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Position
LG 11:complement(7061975..7073083)
Genome browser
AA seq
378 aa
AA seq
DB search
MAVDSMPPIVYTQLNYLLTHSPHSIKVEQIWSGSKNPGLLDRFTLAIPFCLDYIKWDVIY
NAQFPLLAPDIVFGPEDENFRPYPAGGEGDLKPKNSLSDWNCKDPTRLLSLILELRSLYM
AYQKKRVGEVDDERLKFEINTIYSREGIEMYMSSGVDKPEEVKFAVPLLEMDLNKMVAGS
TWRHQQKIYLQVIYPVSRKYLAMASAPRLKLVSSPELKAFFSIDEFRLPSWLEGMCMAEY
LPTLEEMLESQIRDSISSIEVRRKFITALAIPFGRPVESDPVFCRKATFLACSGVFTFLV
HISLPLQFPRQQPALMLQSSQHFHSHPGNAPIKSAILQDYPWSPRWDVVEMADRIFDYLV
EECLNFKKHCNEVLVQQR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgatagcatgcctcccatcgtctacacacagctcaattaccttctcactcat
tcccctcactccatcaaggttgagcagatatggtctggttcgaagaatcctggtttgctt
gatcgatttacattagcgatacccttctgtctcgattatattaaatgggatgttatctac
aatgcacaatttccgttgctggcaccggatattgtttttggacctgaagatgagaacttt
cgaccataccctgctggcggagaaggagacttgaaacctaagaacagtttatctgattgg
aattgcaaagacccaactaggctattgtctctgattcttgaacttaggagtttgtacatg
gcataccagaaaaaacgtgttggggaagttgatgatgaaagactgaagtttgaaatcaac
accatttattctcgggagggaattgaaatgtatatgagctctggcgttgacaagccagaa
gaggtaaaatttgcagtgcctttgctggagatggatttaaacaaaatggttgcagggtca
acctggcgtcaccagcagaagatatacttacaggttatatatcctgtcagtagaaaatat
ttggcaatggcttcagctccacgtttaaaattggtatcatcacctgagttgaaggctttc
ttctccattgatgagttcaggcttccttcttggttggaagggatgtgcatggctgaatat
cttcccactttagaggagatgcttgaatcacagataagagattctatttcatctattgaa
gttagaaggaagtttattacagcattggctattccttttggaaggccagtagaatctgat
ccagtattttgcaggaaggcaacatttctagcttgctctggcgtgtttacatttctggtg
cacatttcccttccacttcagttcccaaggcaacagccggctctgatgcttcaaagttcg
cagcattttcactctcaccctggtaatgcaccgatcaagtcggctattttgcaagattat
ccatggagtccaagatgggatgtggtagaaatggcagacaggatcttcgattatctcgtg
gaagaatgtttgaatttcaagaaacactgcaatgaagtactggtgcagcagcgttag
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