Cynara cardunculus var. scolymus (artichoke): 112523797
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Entry
112523797 CDS
T05604
Name
(RefSeq) uncharacterized protein At4g19900-like
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ccav00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112523797
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
112523797
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112523797
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
112523797
Glycosyltransferases [BR:
ccav01003
]
Glycan extension
P blood group
112523797
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
112523797
NCBI-ProteinID:
XP_024989242
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Position
LG 12:25819899..25821344
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AA seq
481 aa
AA seq
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MEFNTKNKKRSLFALISLVFLFLLSFNGASIFSVKIPSLGSHSPGKPVRDSRNLISVSSS
SSSSHAVKGEAPSTISIPHLKLQTHSVEKPVASAGDSKNFVSVPYFRYTVQHPQKQMAPA
KEETQNINPNTHLPLLRKSHSLSVESEDSPIRNKKLLKTLATLGSSRGRRGDDFPARVKE
HFSKKNDSVSCKVRFFMTWISPLKSFTERAFHSIESIFKTHPNGCLLIVSNSLDSIKGRQ
ILKPFSDNGFRVTAVSPDFSYLFKNTMAESWFSRLIQGHVHPGDIPLGQNISNLLRLCLL
YKYGGVYIDTDVIVLKSFAKLKNSIGAQTIDPNSKNWSRLNNAVMVFDKMHPLLYKFIEE
FALTFNGNKWGHNGPYMVSRVVSRLQGRPGFNFTVLPPMAFYPVNWDKVRILFRGAKNES
DSRYLKGKLEQIRNQSYTVHLWNKQSRVFHIEDGSILRKILSVQCIFCGSSSNEYIANTI
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaattcaacaccaaaaacaagaagagatctctcttcgctttgatttcactcgttttc
cttttcttgctatctttcaatggcgcttcgatcttctccgtcaagattccttcactgggt
tcccactcgccgggaaaaccagtccgagactccagaaacttgatctcggtatcttcttcc
tcatcgtcgtctcatgcagtaaaaggagaagctccgtctacaatttcaattcctcatttg
aaattacagacccattccgtcgaaaaaccagtcgccagcgccggagattcgaagaacttc
gtctctgtaccttacttcaggtacacggtacaacacccacaaaaacaaatggctccggcg
aaagaagaaacccaaaatataaatccaaacacccatttgcctcttttgcgtaaatcccac
agtttatcagttgaatctgaggattccccaatcagaaacaagaaactcttgaagacgttg
gctactttggggtcttctcgcggccgccggggagacgattttccggcgagagtaaaggaa
cattttagcaagaagaacgacagcgtttcatgcaaggttcgtttctttatgacttggatt
tctccattgaagtcgtttactgaaagagcatttcactccatcgaatccatattcaaaacc
catccaaatgggtgtcttctgattgtatcaaactcgttggattcgatcaaaggacgacag
attctgaaacccttttcggacaacgggttccgagtaactgcagtttctcctgatttctct
tatctgttcaagaacaccatggcagaatcttggttttcaaggctaatccaaggtcatgtt
catcctggtgacatcccattaggccaaaacatatccaatctccttcgtctttgtttgtta
tataaatatggtggagtttatatcgacacagatgttattgtcttgaaaagtttcgccaaa
ttgaagaactcgatcggagcacaaacaatcgatccaaattccaagaactggagcaggttg
aataatgcagtcatggtgttcgacaaaatgcatcccttactctacaaattcattgaagaa
tttgctctaactttcaatggtaataaatggggtcacaatggtccttacatggtttcaagg
gtggtttcaaggctgcaagggagacctggattcaattttaccgttttacccccgatggcg
ttttatcctgttaactgggacaaggtccggatcctctttcgtggggctaaaaacgagtcg
gattcaagatacttgaagggtaaacttgagcagattcgaaaccaaagttataccgttcat
ctttggaataagcaaagtagagtgtttcatatcgaagatgggagcattcttagaaagatt
ttatctgttcagtgtattttctgcggttcatctagcaacgaatatatcgcaaatactata
ggataa
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