KEGG   Cynara cardunculus var. scolymus (artichoke): 112524863
Entry
112524863         CDS       T05604                                 
Name
(RefSeq) putative DNA glycosylase At3g47830
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112524863
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112524863
Enzymes [BR:ccav01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     112524863
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     112524863
 Prokaryotic type
     112524863
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 112524863
NCBI-ProteinID: XP_024990576
LinkDB
Position
LG 13:complement(19209007..19210416)
AA seq 158 aa
MRFLTWLGSFFFYMCHDAGDSRRRVKRLESSVLAADSKCIENAIRCGGLAPTKASCIKNM
LSCLFEMRGELCLEYLRDLSVDEIKMELSQFKGIGPKRWPRSFIILNELQVACVLMFNLQ
QDDFPVDTHIFQIAKAIGWVPIEADTKHVISSNSLLLP
NT seq 477 nt   +upstreamnt  +downstreamnt
atgcgttttctgacctggttaggttcctttttcttctatatgtgtcatgatgcaggtgat
tcaaggaggagggtaaaaaggttggaaagttctgttcttgctgctgattcgaagtgcatt
gagaatgctataagatgtggagggttagccccaacaaaggcttcttgtataaagaatatg
ttgagttgcctgtttgagatgagaggggagttatgcttggagtacctgcgggacttgtca
gttgatgaaataaagatggaactctctcaattcaaggggatcgggcctaaacgttggcca
agaagttttataattttaaatgaattgcaggtggcatgtgtattgatgtttaatcttcag
caagatgatttcccagtagatacacatatttttcagattgcaaaggcaattggttgggtg
cccatagaggcagacactaaacatgttatatcgtccaactcgctattgcttccttag

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