Caretta caretta (Loggerhead turtle): 125620722
Help
Entry
125620722 CDS
T09292
Symbol
MMP2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
125620722 (MMP2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccay01002
]
125620722 (MMP2)
Enzymes [BR:
ccay01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
125620722 (MMP2)
Peptidases and inhibitors [BR:
ccay01002
]
Metallo peptidases
Family M10
125620722 (MMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
125620722
NCBI-ProteinID:
XP_048672740
LinkDB
All DBs
Position
12:complement(11095305..11146040)
Genome browser
AA seq
658 aa
AA seq
DB search
MKTHIVFSLFAFIFKVLVFQLYFFHQILAAPSPIIKFPGDSSPKTDKELAVQYLNTYYGC
PKDNCNLFVLKDTLKKMQKFFGLPETGDLDQNTIETMKKPRCGNPDVANYNFFPRKPKWE
KNQITYRILGYTPDLDSETVDDAFARAFKVWSDVTPLSFSRINDGEADIMINFGRWEHGD
GYPFDGKDGLLAHAFAPGPGVGGDSHFDDDEQWTLGEGQVVKVKYGNADGEYCKFPFLFN
DKEYNSCTDAGRNDGFLWCSTTYNFDSDGKYGFCPHESLFTMGGNSEGQPCKFPFKFQGA
SYDSCTTEGRTDGYRWCGTTEDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFIFLGNKY
ESCTSAGRSDGKMWCASSGNYDDDRKWGFCPDQGYSLFLVAAHEFGHAMGLEHSEDPGAL
MAPIYTFTKNFRLSQDDIKGIQELYGGSTDFGPDPAPTLGPVTPVLCKQDIVFDGISQIR
GETFFFKDRFMWRTVNPRNKPTGPLLVATFWPEVPEKIDAVYEAPQEEKTVFFSGNEYWV
YSASTLERGYPKKLTSLGLPPEVQNVNAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGF
PKLIADAWNGVPDNLDAVLDHSGSGYSYFFKDWYYLKLEDTSLKIVKVGNVKSDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcacattgtttttagcctttttgccttcatttttaaagtactcgtgttccag
ttatatttttttcaccaaattttagctgcaccttccccaatcattaagtttcctggagac
agctcccccaaaacagacaaagaactagcagtgcaatacctgaatacatactatgggtgc
ccaaaagacaactgcaatttattcgtgctgaaagatactttgaagaaaatgcagaaattc
tttgggctgcctgaaacaggagatctggatcaaaacactattgagacgatgaagaagccc
cgctgtggtaatccagatgtggctaattataacttttttccaagaaagccaaaatgggaa
aaaaatcagataacgtacaggattttagggtatacaccggatttggactctgaaacagta
gacgatgcctttgcccgagcctttaaagtctggagcgatgtcacaccactgtcattttcc
cgaattaatgatggagaagcggacattatgattaattttggacgatgggagcatggtgat
ggatatccatttgatggcaaggatggcctcctagctcatgcttttgcacctgggccaggt
gttggaggtgactcccattttgatgatgatgaacagtggactctgggagagggacaagtt
gttaaggtgaagtatgggaatgcagatggcgaatactgtaaatttcccttcctgttcaat
gataaggaatataacagctgtactgatgcagggcgcaatgatggattcctttggtgctca
accacatacaactttgattctgatggcaaatacggattctgtccccatgaatctcttttc
acgatgggtggaaatagtgaagggcagccatgtaagttccccttcaaatttcaaggcgca
tcctatgacagctgtacaacagaaggaaggacagatgggtaccggtggtgtggaactaca
gaagactacgacagagataagaaatatggcttctgcccagagactgcaatgtcaacggtt
ggtggaaattcagaaggagctccttgtgtatttcctttcattttccttggcaataagtat
gaatcctgcacaagtgctggacgtagtgatggcaaaatgtggtgtgcttccagtggtaac
tatgatgatgaccgcaaatggggcttttgtccagatcaaggttacagtcttttcttggtt
gctgctcatgaatttggccatgccatgggactagagcactccgaggacccaggagctcta
atggctccaatctacacatttaccaagaacttcagactatctcaggatgatattaaagga
atccaggaactttatggaggatccactgattttgggccagatccagctccaacacttgga
ccagtcaccccagtgttatgcaaacaagacattgtatttgatggtatctcccaaattaga
ggagaaacgtttttcttcaaagacagattcatgtggaggactgtaaacccccgaaataaa
cccacaggtcccttgcttgttgctacattctggccagaggtgccagaaaaaatcgatgct
gtctatgaggcccctcaggaagagaagacagtgtttttttcaggaaatgagtactgggtt
tattcagccagtactttggagagaggatatccaaagaaactcaccagtctggggttacct
cctgaggtacaaaacgtcaatgcagcttttaactggagcaaaaacaagaagacatacatt
tttgcaggagacaagttttggaggtacaatgaagtaaagaagaaaatggaccctgggttc
cctaaattaattgctgatgcttggaatggagttccagataacctagatgcggtgctggat
catagtggaagtgggtacagctactttttcaaggactggtattatctaaaactggaagac
actagcttgaagattgttaaagtcggcaatgtaaaatccgattggttgggttgctga
DBGET
integrated database retrieval system
