Caretta caretta (Loggerhead turtle): 125621135
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Entry
125621135 CDS
T09292
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
ccay04514
Cell adhesion molecule (CAM) interaction
ccay04672
Intestinal immune network for IgA production
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125621135
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125621135
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125621135
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125621135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125621135
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125621135
Exosomal proteins of epithelial cells
125621135
Exosomal proteins of breast milk
125621135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_II_beta
C1-set
Ig_3
Ig_2
C2-set_2
ig
MHC_I
I-set
RnlB_antitoxin
DUF8108_M
Motif
Other DBs
NCBI-GeneID:
125621135
NCBI-ProteinID:
XP_048673608
LinkDB
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Position
13:complement(407709..489472)
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AA seq
268 aa
AA seq
DB search
MGVGRILGAGSCWAGALLVTLTVLRTHLARCTEPPGRYVYQVNSECLFTNGTERVRFLDR
YLYNGRQILHFDSELGVFVADTELGRPDAEYWNKDPAFLAERRAAVDTFCRHNYVVHTPF
TVARRVQPKVKVSPTTSGSGSHSHLLVCSVTGFYPGGIEIKWLKNGQEQTAGVVSTELLQ
NGDWTFQILVMLEMSPRRGDVYTCQVEHISLRDPLSVHWEAQSDSARSKMLTGVGGFVLG
LIFLVPGLLIYLKNKKGRPVPQPAGLLS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgggtcggatcctgggggctgggagctgctgggctggggctctgctcgtgaca
ctgacggtgctgagaacccacctggctcgttgcacggagcccccagggcggtacgtgtac
caggtgaactcggagtgtctgttcaccaacggcaccgagcgggtccggttcctggaccgg
tacctctacaacgggcggcagatcctgcacttcgacagcgagctgggggtgttcgtggcg
gacacggagctgggccggcccgacgccgagtattggaacaaggacccggcgttcctggcg
gagcggcgggcggcggtggacacgttctgccggcacaactacgtggtgcacacgcctttc
accgtggcccggagagttcagcccaaggtgaaagtttcccccacaacatcggggtctggg
tcccactcccacctgctggtttgctccgtgacggggttttaccccggggggatcgagatc
aagtggctgaagaacgggcaggagcagacggccggggtggtgtccacggagctgctccag
aacggagactggaccttccagatcctggtgatgctggagatgagcccccggcgcggggac
gtctacacctgccaggtggagcacatcagcctgcgggaccccctcagcgtgcactgggag
gcgcagtctgactccgccaggagcaagatgctgacgggcgtcgggggcttcgtgctgggg
ctgatcttcctggtgccgggactcctcatctacctgaagaataagaaagggcgcccagtt
ccccaacctgcagggctcctgagttag
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