Caretta caretta (Loggerhead turtle): 125621146
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Entry
125621146 CDS
T09292
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
KO
K06752
MHC class II antigen
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04145
Phagosome
ccay04514
Cell adhesion molecules
ccay04672
Intestinal immune network for IgA production
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125621146
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125621146
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125621146
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125621146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccay04147
]
125621146
Exosome [BR:
ccay04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125621146
Exosomal proteins of epithelial cells
125621146
Exosomal proteins of breast milk
125621146
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_2
Ig_3
ig
C2-set_2
MHC_II_beta
I-set
Motif
Other DBs
NCBI-GeneID:
125621146
NCBI-ProteinID:
XP_048673645
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All DBs
Position
13:559586..568190
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AA seq
260 aa
AA seq
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MKLVLWLLSMALSHHGAGGFLVHLATECPLAANGSVLWFSFTFVFNKNPLVCYNDHDQLF
EACDMGLLHNIATNMATQLNADPDWRRRMAGGRQACQSQSQRLWSRTGQRKTPPSVRIVS
TALPNPAGTTRLTCHVWGFYPAEVLVTWLRNGSPVEPTENGLSPALANGDWTYQTHLSLL
TAPKPGDTYTCLVQHASLPEPHQEQWGPGLSPGLTVKVSVAVVVLILGLILLGTGMVFWW
RAPAPGYSPLPGHNYAGGST
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtgctgtggctgctgtccatggctctgagccaccacggagcaggcgggttc
cttgtgcacctggccaccgagtgccccctggcagccaacggctccgtgctctggttcagc
ttcaccttcgtcttcaacaagaacccgctggtgtgttacaacgaccacgaccagctcttc
gaggcctgtgacatgggcctgctccacaacatagccacgaacatggccacccaactcaac
gcggaccccgactggcgccggcgtatggcaggggggcgccaggcctgccagagccagagc
cagcggctctggagccgcacggggcaaaggaagacgccccccagcgtccgcatcgtctcc
acggccctgccgaaccccgcggggaccacgcgcctcacctgccacgtctggggcttctac
ccggcggaggtgctggtcacctggctgcggaacgggagccccgtggagcccaccgagaac
ggcctgagcccggcgctggccaacggcgactggacctaccagacccacctcagcctgctc
accgcccccaagcccggggacacctacacctgcctcgtgcagcacgccagcctgcccgag
ccccaccaggagcagtgggggcccggcctgtccccggggctgacggtcaaggtcagcgtc
gctgtcgtggtgctgatcctgggcctcatcctgctgggcaccggcatggtcttctggtgg
agggcgcccgccccaggttattctcccctccccgggcacaactatgctggaggcagcacc
taa
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