KEGG   Caretta caretta (Loggerhead turtle): 125621147
Entry
125621147         CDS       T09292                                 
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
  KO
K06752  MHC class II antigen
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04145  Phagosome
ccay04514  Cell adhesion molecules
ccay04672  Intestinal immune network for IgA production
ccay05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    125621147
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125621147
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125621147
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125621147
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccay04147]
    125621147
Exosome [BR:ccay04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125621147
  Exosomal proteins of epithelial cells
   125621147
  Exosomal proteins of breast milk
   125621147
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 ICAM1_3_5_D2
Other DBs
NCBI-GeneID: 125621147
NCBI-ProteinID: XP_048673646
LinkDB
Position
13:543499..549444
AA seq 251 aa
MEAPGCWGLLLALGLLRGAAATPATEAPPAHVLSRVLFCQPDRPSQGLADTFDGDQLFSF
DFPGARWEPRLPDFQPWVGAQESTEQIRNNSRLCQQLLLVLTNITTGFLPEAKGTPMANV
FTARPLELGKPNTLICQVGNLFPASVTVSWQWLGEPVSQGINTTRYYPTEDLGFLLFSYL
EFTPQEGDVYTCTITRPRDRFTTVAYWVPQNPIPSELLENVLCGLAIALGIFFMVTGIVL
LLKSRRPSPTE
NT seq 756 nt   +upstreamnt  +downstreamnt
atggaggcgcccggctgctgggggctgctgctggccctggggctgctgcggggggcggcg
gccacccccgcgactgaggcgcccccggcccacgtcctgtcccgtgtgctgttctgccag
ccggaccgcccctcgcagggcctggccgacaccttcgacggggaccagctcttctccttc
gacttcccgggggcgcgctgggagccccggctgcccgacttccagccctgggtgggcgcc
caggagagcacggagcagatccgcaacaactcccgactgtgccagcagctgctcttggta
ctcaccaacatcaccacgggcttcctgcccgaggccaaaggcacccccatggccaacgtg
ttcacagcccggcccctggagctgggaaaacccaacaccctgatctgccaggtgggcaac
ctcttcccagcctcggtgacagtgtcatggcagtggctgggggagccggtgagccagggc
atcaacaccacgcggtactaccccaccgaggacctgggcttcctgctcttctcctacctg
gagttcaccccgcaggagggggacgtctacacctgcaccatcacgcggcccagggaccgc
ttcaccaccgtggcctactgggtgccccagaaccccatcccatcagagctgctggagaac
gtactgtgtggcctggccatcgccctgggcatcttcttcatggtcaccgggatcgtcctc
ctcctcaaatcccgcaggcccagccccacagagtga

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