Caretta caretta (Loggerhead turtle): 125621196
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Entry
125621196 CDS
T09292
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00514
Other types of O-glycan biosynthesis
ccay04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
125621196 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125621196 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccay01003
]
125621196 (RFNG)
Enzymes [BR:
ccay01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
125621196 (RFNG)
Glycosyltransferases [BR:
ccay01003
]
Glycan extension
O-Glycan
125621196 (RFNG)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
125621196
NCBI-ProteinID:
XP_048673748
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Position
13:complement(37732420..37747476)
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AA seq
402 aa
AA seq
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MTLSCIGLNKICFLLSVTFCAFLLLLIPKFQTNWRHRGYPQPRPPPPFNASCKSEFHHHQ
ADPSSTDNLDSEGTDNAHSVKDETVEKWGDYSLHAGGASLKLEEQDGSPTSSLHTMLKDH
HGPAGDSIKENLELKDIFIAVKTTRKYHKTRLDLLFQTWISQAKRQTFIFTDWEDRELRL
RAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPQNLLRLLSAF
SHSQDVYVGRPSLDHPIEAADHVRSDGSTTVKFWFATGGAGFCVSRGLALKMSPWASLGN
FISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGETVLQQVTLSYGGP
ENKHNVVSVAGVFGLQQDPTRFRSVHCLLYPDTTWCPTKNIL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcctgcattggactcaataagatctgcttcctgctgtccgtgaccttctgt
gctttccttctcctgctaatccccaaattccagactaactggagacataggggatatcca
caaccccgtccaccacctccttttaatgcttcctgcaaaagtgagttccaccaccatcag
gcagatcccagctcaacagacaatttggacagtgagggaactgataatgcacacagtgtg
aaagatgaaactgtagaaaaatggggggattacagcctacatgctgggggagccagcctg
aaacttgaggagcaggatgggagccctaccagttctcttcacactatgttgaaggaccac
catggacctgcaggtgattccattaaggagaatttggagctgaaggatatttttattgct
gtgaaaacgacaagaaagtatcataaaactaggctggacttgctcttccaaacctggatt
tcgcaggccaaaagacagacgtttatattcacagattgggaggaccgtgaactgcgccta
agagcaggagatcacatgatcaacaccaactgctctgctgttcacacccgccaggcactc
tgctgcaagatgtctgtggaatacgataaattcctcgaatctgggagaaaatggttttgc
catgtggatgatgacaactatgtgaatccacagaatctcctgcgtctcttgtctgccttc
tcacacagccaggatgtatatgtggggaggccaagcctggaccaccccattgaggcagct
gaccatgtccggagtgatggatcaacaactgtgaagttctggtttgccacaggtggagca
gggttctgtgtcagcaggggccttgccctgaagatgagtccctgggccagcttgggtaac
ttcatcagcactgcagagagggtccgtcttcctgatgactgcaccatcggttacatcatc
gaggggctgctagaagtgaagctgctgcacagccccttgttccattcccatctggagaat
ctgcagcgactacaaggcgagacagtgctgcagcaggtcaccctgagttatgggggccct
gagaacaaacacaatgttgtgagtgtggcaggagtgtttggcttgcagcaagatccaacc
cgattcagatctgtccattgtcttctctaccctgacactacctggtgtcccactaaaaat
atactgtga
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