KEGG   Caretta caretta (Loggerhead turtle): 125621277
Entry
125621277         CDS       T09292                                 
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay04010  MAPK signaling pathway
ccay04060  Cytokine-cytokine receptor interaction
ccay04150  mTOR signaling pathway
ccay04210  Apoptosis
ccay04217  Necroptosis
ccay04350  TGF-beta signaling pathway
ccay04620  Toll-like receptor signaling pathway
ccay04621  NOD-like receptor signaling pathway
ccay04622  RIG-I-like receptor signaling pathway
ccay04625  C-type lectin receptor signaling pathway
ccay04920  Adipocytokine signaling pathway
ccay05132  Salmonella infection
ccay05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    125621277
   04350 TGF-beta signaling pathway
    125621277
   04150 mTOR signaling pathway
    125621277
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    125621277
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125621277
   04217 Necroptosis
    125621277
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    125621277
   04621 NOD-like receptor signaling pathway
    125621277
   04622 RIG-I-like receptor signaling pathway
    125621277
   04625 C-type lectin receptor signaling pathway
    125621277
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    125621277
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    125621277
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125621277
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ccay04052]
    125621277
   00536 Glycosaminoglycan binding proteins [BR:ccay00536]
    125621277
Cytokines and neuropeptides [BR:ccay04052]
 Cytokines
  Tumor necrosis fators
   125621277
Glycosaminoglycan binding proteins [BR:ccay00536]
 Heparan sulfate / Heparin
  Cytokines
   125621277
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 125621277
NCBI-ProteinID: XP_048673967
LinkDB
Position
13:complement(1479580..1482328)
AA seq 240 aa
MSTESLVCDIEKGGVIVVRESRPGDGRWKCLSICSFLLLMGATAVFALLHFRNGGPVVSQ
DPKEPRSSGHTQQLTGPMTMKLQAQSLNKPAAHVVASTDSKELIWTDKVAHTMMQNGMAL
VNNKLVVPSDGLYFIYSQVVFKGDKCPEESIYLQHTIFRYSVRVPRNVALLRAIKSFCEG
SKAAKNEKGVQFESIYQGAVFQLMKGDEISSEIHSAQYLDLNSNGQVYFGVIALELGVPQ
NT seq 723 nt   +upstreamnt  +downstreamnt
atgagtaccgaaagtctggtctgcgacatcgagaaggggggcgttatcgtggtgcgggag
tcgcggcccggcgacggccgctggaagtgtctcagcatctgctccttcctgctgctgatg
ggagccacggccgtcttcgctctgctgcatttcagaaacggggggcctgtggtgagccag
gaccccaaagaacccaggagttcgggccacacacagcaactcacaggtccgatgacgatg
aagttgcaagcccagtcgctgaacaagccagctgcccatgtcgtcgcatccactgactcc
aaagaactgatctggactgacaaagtggcacacaccatgatgcagaacgggatggcactg
gtaaacaacaagctggtggtcccgtccgacggcctctacttcatctactcccaggtggtc
ttcaagggagacaaatgtccggaggagtccatttatctccagcataccatctttcgctac
tccgtgagagtacccagaaacgttgccttgctgagggccatcaagtcgttctgcgagggg
tccaaggcagccaagaacgagaagggggtacagttcgagtccatctaccaaggagctgtc
ttccagttgatgaaaggcgacgagatctcctctgaaatccactcggcccaatatttagat
ctgaacagcaacgggcaggtgtattttggggtgatcgcattggaattaggagttccccaa
taa

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