Caretta caretta (Loggerhead turtle): 125622305
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Entry
125622305 CDS
T09292
Symbol
CD40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04060
Cytokine-cytokine receptor interaction
ccay04514
Cell adhesion molecule (CAM) interaction
ccay04620
Toll-like receptor signaling pathway
ccay04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125622305 (CD40)
04514 Cell adhesion molecule (CAM) interaction
125622305 (CD40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125622305 (CD40)
04672 Intestinal immune network for IgA production
125622305 (CD40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ccay04050
]
125622305 (CD40)
04090 CD molecules [BR:
ccay04090
]
125622305 (CD40)
Cytokine receptors [BR:
ccay04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125622305 (CD40)
CD molecules [BR:
ccay04090
]
Proteins
125622305 (CD40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
125622305
NCBI-ProteinID:
XP_048676219
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All DBs
Position
14:complement(705694..718177)
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AA seq
464 aa
AA seq
DB search
MAPSRRPQQPERFDFLSVAALQMRTVEEPQLGGVVEGSGFMPPWSPASAMLNALPAPLPS
PHWASGSDVNCTPEQYPHDGRCCRRCGPGDKLLSDCTASKNTDCGACEAGHFQSGWTKER
HCTPHRSCDLNAGLLTRSPGDAKRDAVCECLQGMFCSSPACQTCLNVTKCKPGEGVARKA
DNFSDTACVPCEHGSFSNTSSASEPCRPWTRCETRGLVLKTTGTNLLDVACEPGRGRSPV
LISIMAFTAACLLGLTVFCLYQKGPGAAGSRGACVAGTAPAASHGGVRGARRAPGLPGAG
DPAGAPARGAGGRQGEPHLGAGEAVRPCRGEHLPPPAHTARAGLLRPAHSRAQPRGLCHG
ATRSPPPLPASAPQGHWQGQRDGAQHSREQSIHGRVQRVGWSGSSHPFPTTPVPFRGLIC
LAYPEFHLTEKRLACKVRHRNPRGSQRTSTEQWLTFSLYHIVLK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctcccagccgccgcccacaacagccagaacgattcgacttcctctccgtggcagcc
ctacaaatgagaacagtagaggagccgcagctgggtggggtggtggaaggttctggcttt
atgcctccgtggagccccgcgagcgccatgctgaatgcactcccagcgccactcccgtca
cctcactgggcgtctggcagcgacgtgaactgcaccccagagcagtatccgcatgatggc
aggtgctgccgccgctgtgggccaggagacaagctgctgtctgactgcacggcctcgaag
aacactgactgcggggcgtgcgaggcgggacacttccagtccggctggaccaaggagaga
cactgcaccccccacagatcctgcgatttgaacgctggacttctcacgaggagccccggg
gacgccaagcgcgatgccgtgtgtgagtgcctgcagggcatgttctgctctagccccgcc
tgccagacctgcttgaacgtcacaaagtgcaagccgggcgaaggagtcgctcggaaagcc
gacaacttttcagacacagcctgcgtgccgtgtgaacatggcagcttctccaacacctcc
tccgcctccgagccgtgccgcccctggacgaggtgtgagacgcgggggctggtgctgaag
acgactgggacaaacctcttggatgtggcttgtgagcctggccgtggccgttccccagtg
ctgatctccattatggcctttactgcagcctgtctcttggggctcactgtcttctgcctg
tatcagaaagggcctggagctgccggatcccgtggagcttgtgttgcaggcaccgcccca
gcagccagccacggcggggtgcgaggagcacgacgagcgccaggacttcccggtgcagga
gaccctgctggggcgccagcccgtggcgcaggaggacggcaaggagagccgcatctcgga
gcaggagaggctgtaaggccctgtcgtggggagcatctgcctcccccagcacacacagcc
agggctggcctcctccgcccagcacacagcagggcccagcccagggggctgtgccacggg
gcaacccgcagccctccgcccctccctgcctcggccccgcagggtcattggcaggggcag
agagacggtgcccagcacagccgggagcagagcattcatgggcgcgtacagagagtgggg
tggagcggcagctctcaccctttcccgacgactcctgtacccttcagggggctgatctgt
cttgcgtaccccgagtttcacctcacagaaaagcgacttgcttgcaaagtcagacataga
aatcccagagggtcccagcgcactagtactgaacaatggctgactttctcattgtaccat
atcgttctaaaataa
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