Caretta caretta (Loggerhead turtle): 125623442
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Entry
125623442 CDS
T09292
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
ccay04137
Mitophagy - animal
ccay04141
Protein processing in endoplasmic reticulum
ccay04210
Apoptosis
ccay04217
Necroptosis
ccay04621
NOD-like receptor signaling pathway
ccay04622
RIG-I-like receptor signaling pathway
ccay04920
Adipocytokine signaling pathway
ccay05132
Salmonella infection
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125623442 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125623442 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125623442 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
125623442 (TRAF2)
04217 Necroptosis
125623442 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125623442 (TRAF2)
04622 RIG-I-like receptor signaling pathway
125623442 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125623442 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125623442 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
125623442 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccay03019
]
125623442 (TRAF2)
04121 Ubiquitin system [BR:
ccay04121
]
125623442 (TRAF2)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125623442 (TRAF2)
Messenger RNA biogenesis [BR:
ccay03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125623442 (TRAF2)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125623442 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_6
zf-C3HC4_2
Thioredoxin_3
zf-RING_5
zf-C3HC4_5
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
125623442
NCBI-ProteinID:
XP_048678815
EnsemblRapid:
ENSCECG00000004484
LinkDB
All DBs
Position
16:complement(22911675..22953422)
Genome browser
AA seq
554 aa
AA seq
DB search
MAVLPVWLAGSGARLPALEAHLGFLVHMAAANSTPPGSLDLNQPGFSKEILGTKLEGKYL
CSECKNILRRPFQAQCGHRYCSYCLKKLISSGPQKCAACIQEGIYEEGVSILETNSAFSD
NAARREVESLPAVCINDGCPWKGTIKEYESCHEGDCPFMLIECLACKGMIKLNEKERHSE
RECPERSLNCKYCKSLFYFPDIKAHDEICPKFPLSCEGCGKKKIPREKFQDHVKTCGKCK
VPCRFHVVGCTEMVENEMLLEHESKCVGEHLYMLLGFVLRLKAESGDLKHHPTRGSMQDN
SMLLTTNSLCSESELSESLELQGRCEALERKTITFENIVCVLNREVERVSLTVEAYSRQH
RLDQEKIEMLSNKVRQLERSTGLKDLAMADMEQKIRDMEASTYDGVFIWKISDFARKRQE
AIAGRCPAIFSPAFYTSKYGYRMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFN
QKVTLMLLDQNNREHIIDAFRPDVTSSSFQRPVTEMNVASGCPLFCPVSKMEAKNSYVRD
DAIFIKAIVDLTGL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcttccggtgtggctggcggggagcggagcgaggctgccggctcttgaggca
catctggggtttttggttcacatggcagcagcaaactcgactccacctggttctttggat
ttaaaccagcctggattttcaaaggagatactggggactaaattggagggcaaatacctc
tgctccgagtgcaagaatattctgaggaggccatttcaagctcagtgtggacaccgctat
tgttcttactgtctgaagaaacttataagctctgggcctcagaagtgtgcagcctgtatt
caggaaggaatatatgaagaaggagtttctattttagaaacaaattcggctttctcagat
aatgcagctcgtcgggaggtggaaagtctgccggctgtctgtattaacgatggctgccca
tggaaagggactattaaagagtatgagagctgccatgaaggggactgcccgttcatgctg
attgagtgcctggcatgtaagggaatgatcaaactgaatgaaaaggagcgccattcggag
cgggaatgccccgagagaagcctcaactgcaaatactgcaaatcgcttttctactttcca
gacattaaggctcatgatgagatctgccctaaatttccactgagttgtgagggctgtggg
aaaaagaagattccaagagagaagtttcaggaccatgtgaagacttgtggcaaatgtaaa
gtgccttgcagatttcacgttgtcggctgcactgagatggtggaaaatgaaatgctgctg
gagcacgaaagcaaatgtgtgggggagcatctgtatatgttgctgggctttgtgctccgc
ctcaaggctgagtctggagacttaaagcaccacccaacccgtgggtcaatgcaggacaac
tccatgctcttaacaaccaattcgctgtgctctgaatcagagctctctgagtccttggag
ctgcaggggaggtgcgaggccctagagaggaagacgatcacatttgaaaatattgtgtgt
gtgctgaatcgggaagtggaaagggtgtctctgacagtggaggcgtatagtcggcaacat
cggctggatcaggagaaaattgaaatgctcagtaacaaggtccggcagctggaaaggagc
actggactgaaagatctggccatggctgacatggagcaaaagatccgtgacatggaagct
tccacctatgatggcgttttcatctggaagatttcagactttgccagaaaacgtcaggag
gcgatagctggccgctgtcctgccatcttctctccagctttctacacaagcaaatatggc
tataggatgtgcctgcgtgtgtacctaaacggggacggcactggacgtgggacccacttg
tctctgttctttgtggtgatgaaaggacccaacgatgcacttctgcgatggcccttcaat
cagaaggtgaccctgatgctgctggatcagaataaccgggagcacattatcgacgctttc
cgacccgatgtgacgtcatcgtccttccagcgacccgtcaccgagatgaacgttgccagt
ggctgcccactcttctgcccagtctccaagatggaggccaagaactcttacgtgcgtgac
gacgccatctttattaaagccatcgtagatctcacaggcctctaa
DBGET
integrated database retrieval system
