Caretta caretta (Loggerhead turtle): 125626664
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Entry
125626664 CDS
T09292
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03440
Homologous recombination
ccay03460
Fanconi anemia pathway
ccay04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125626664 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
125626664 (BRCA1)
03460 Fanconi anemia pathway
125626664 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccay01009
]
125626664 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccay04121
]
125626664 (BRCA1)
03036 Chromosome and associated proteins [BR:
ccay03036
]
125626664 (BRCA1)
03400 DNA repair and recombination proteins [BR:
ccay03400
]
125626664 (BRCA1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125626664 (BRCA1)
Protein phosphatases and associated proteins [BR:
ccay01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125626664 (BRCA1)
Ubiquitin system [BR:
ccay04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125626664 (BRCA1)
Multi subunit type E3
BRCC complex
125626664 (BRCA1)
Chromosome and associated proteins [BR:
ccay03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125626664 (BRCA1)
DNA repair and recombination proteins [BR:
ccay03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125626664 (BRCA1)
BRCA1-A complex
125626664 (BRCA1)
BRCA1-B complex
125626664 (BRCA1)
BRCA1-C complex
125626664 (BRCA1)
BRCA complex
125626664 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
125626664 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
BRCT_2
zf-RING_5
zf-Nse
zf-RING_6
zf-RING_10
zf-MIZ
U-box
zf-ANAPC11
RTT107_BRCT_5
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125626664
NCBI-ProteinID:
XP_048685871
LinkDB
All DBs
Position
24:547981..598501
Genome browser
AA seq
1905 aa
AA seq
DB search
MDSSVAAIGDVQSVLLAMQKNLECPICLELIKEPVSTKCDHIFCRFCMFKLLSKKKKGPA
QCPLCKTEVTKRSLQENPRFKQLIEGLLETIHAFELDTGIKFLNSQDFSKKPVETNSTGL
LGKEGSIIQSKGYRNRQKRIKEQEQESPTLEANAGAQVADNMVRRSSLRNKRQKCESGKA
VYIEFGSDSSEDLFKKAGGCGMGHTKLFQTPPQKGEREEEIKYAEKESESPYNMWPSTSD
AGEILSSDILGECGVSEEDSKGTWNGIEDFEAAQVNVAEGHLKESQGISASNSQAEQRDR
TGNASSLLNEDTSLFHSAEEMDAGETPFSSENKESGLAHSSENQLDKSKKSGNGVQHTEA
VETCQPESNSLHEREPALESLLQPKTLHGNPLSQVSGKRLKRSIQKVNEWFSKSNEMLSS
GSSQDAPAGASDTEDGDSYLSDRESCISEKTDLMVNCTEVVVGCENDRNLSKSTVHNIED
KIFGKTYKRERKSNPLVHTREMPLTPKVEDVTTDMKPSSNSRTSKLKRKRKTASDLQPAD
FIKKRDEKDLKKHSEGVNQCIVGRNARRKKGGEGSTVVNESPMGVKNGDNISAELSLREG
ESILKNDTEKVTCNSTDGKPAQDTRDRKNTKKMRSSLTKRSRHSARPVCALQLVVDRNSS
CPDQTELQIDSYPSSEEPKKVDSENKRVRRSRRLQLLTEKMTKKTRRSEPNERARKHASE
SKDSSSGLQMNVLVHVPECKDPDEQQDVLNHSIPLSDTDLKGNALEVDKTPPNPENCSDG
MQTGKGLLYDEISMEDLNACSVVPDTDSQDNENQGSHSLLQPHSTNVDQAACLVQNLSEN
NQCAAFEPKNRELCACSSKTNRHCTENDLESFRNSKSHEAKIISELNTETEDSELETQYF
RNMFRHSKRLSFTLHPSPVKESVTESTASETLRKSGASSVEYRHNNSDLKNEPPYVKKTV
GLDEVCERDEPKTCESAKGISGRSPGIHFSRDTECGHVSDDGKNISQVPDQVQLFSPPRV
ATAKIKSRSRSRLQKRRQPKEKRISPEMVIESQLSQNKSNRSLGDQRNIEERISQRTDLS
TINETGSNQGVKAEEAENKGPVLNFQPKPVLVYPVVCQQSPAEFSCKVIEKNGYEGECKQ
VKSDKEQVSQIASIGVPECLISEEALEQPTEGTSGFPLLSETPDGLLCSADDIKENISIC
EIDRKEISAVFVKTGERASLRELDSGSSSSKSRSQNFVREPRRPAWKLQSSEEDSSEDEE
LPCFQALIFGKLVSTPLQPTEQIMSTVESSSPEEILALLNSSSGNNKAVQKSPGVILRDT
CVSPSQESECSVNLFSSQSNMSEDSTNRLQELKKPITLAPCSKEMSSFSGSREASPNGNE
ELTGRKTDLEDGHQQDQNVQPNLGEASGYDSEASHQGDSSGLSSQGEILTTQQKDAMQNN
LKELQQEMAVLEAVLEEHGSQGFEFPAPHSELPPSRVEGTLAVGQTRPARGTALISEVNL
ENHKISSSKGLSADGFHVMPSDHSNTKNKELEEEGLRSPALQLSHPKSHLFKKEALEQGH
WCPSLWKAKTRSQEGTFQRVGAAVLLEQEAMKPCNRYRLESENAAEQEFGTKLNTAAVPC
GNESRTPNSSPLKFSERLTNCQTAESTNSAAISWNANNGKSAQGCKQERRAFSSASALHT
GVVKENAKSSVVTCRRQMSIVASGLNQSELLLVQKFARKTQSTLSNQITEGTTHVIMKTD
MELVCERTLKYFLGIAGRKWVVSYEWIVQSFKEGKILDEYDFEVRGDVINGRNHQGPKRA
RRSQTGKLFKDFEICCYGPFTDMRTGDLEWMVELCGASVVKQPHLFTHKANSTTVIVVQP
DAWLENTGYRAIPQKCTAMVTREWVLDSVACYECQEFDTYLVSQS
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtctgtggctgccattggagatgtgcaaagtgtgcttttggctatgcagaag
aacttggagtgcccaatatgtttggagttgataaaagagccagtctcaacaaaatgtgac
catatattctgcagattctgtatgtttaaacttctcagcaaaaagaaaaaaggcccagca
cagtgtccactgtgtaagactgaggttaccaaaagaagtcttcaggaaaatccaagattt
aagcagctaattgaagggctactggaaactatccatgcttttgaacttgacactggaatc
aagtttttaaacagtcaggatttttctaaaaaacctgtagaaaccaattctactgggctc
ctggggaaggaaggttccatcatccaaagtaagggctacagaaacagacaaaaaagaatt
aaagaacaagagcaagaaagtcctaccttggaagctaatgctggtgcccaggttgcagac
aacatggtcaggagaagttccctcagaaacaaaaggcagaaatgtgaatctggtaaagca
gtgtacattgaatttggatctgattcttctgaagatctttttaaaaaagcaggtggttgt
ggaatgggacacacaaaattatttcagactccacctcaaaaaggagaacgggaggaagaa
ataaagtatgctgagaaggaaagtgaaagtccatacaacatgtggcctagcacgtcagat
gcaggagaaatactctcatcggatatcttaggtgaatgtggtgtctcagaggaagacagc
aaaggcacttggaatggcatcgaagacttcgaggctgctcaagtgaatgtggctgagggt
catttaaaagagagccagggcatttctgcttcaaactcacaggcagaacagcgtgacaga
acaggcaatgccagctctttactgaatgaggacacaagtttattccacagtgcagaagaa
atggatgctggggaaactccatttagtagtgaaaacaaagagtctggcttagcgcacagc
tcagaaaaccaattagataaaagcaagaagtcaggtaatggtgtccagcatacagaagct
gtagaaacatgtcaacctgagagtaactccctgcatgaaagggaacctgctttggagagt
ctattgcagcccaagactcttcacggcaatcctttgagtcaagtttctgggaaaagactg
aagagaagtattcaaaaagtcaacgagtggttttctaaaagcaatgagatgctctcttct
ggttcctcccaggatgctcctgctggggcatctgacacagaagatggagattcatattta
tcagacagagagtcctgtatttcagagaagactgacctgatggtaaactgcacagaagtt
gtggtgggatgtgaaaatgatagaaatttgtcaaaatcaactgtgcataacatagaagat
aaaatatttgggaaaacgtataaaagagagagaaagtcaaaccctcttgtccacacgaga
gagatgccactgactccaaaagtggaagatgttactactgatatgaaaccctcaagtaat
tccagaacaagtaaattaaaacggaaaagaaagactgcctctgatctccaacctgcggac
ttcatcaagaagagagatgaaaaggatctaaagaagcactctgagggtgttaatcagtgc
attgttggtagaaatgctcgaaggaaaaaaggtggtgaaggttccactgttgttaatgag
agtcccatgggtgtgaaaaatggggacaatatatcagcagaactttccctccgagagggg
gaatccatattgaaaaatgatactgagaaagtaacttgcaacagcactgatggaaagccg
gcacaggatacccgtgaccgaaagaatactaaaaaaatgagaagctcattaacgaaaaga
agcagacattcagctaggcccgtgtgtgctctgcagctggtagtggatagaaactcaagt
tgccctgatcagactgagctgcagattgatagttacccaagcagtgaagagccaaaaaaa
gttgattcagaaaataaacgagtcagacgcagcaggaggcttcagttactgactgaaaaa
atgacaaaaaaaaccaggagaagtgagccaaacgagagagcaagaaagcatgccagtgaa
agcaaagattcctcctctggattgcagatgaatgtgttggtccatgtccctgaatgcaaa
gaccctgatgagcagcaggatgtactgaaccatagcatacctctgtcagacactgatctg
aagggcaatgccttggaagtagataaaacaccccctaatcctgaaaattgttctgatggg
atgcaaactggaaaaggcctcttgtatgatgaaatatcaatggaggatttaaatgcttgt
tctgttgtgcctgatacagattctcaagataacgaaaatcaaggaagccattcacttctg
cagcctcattccacaaatgtggatcaagctgcctgcctagtgcagaatttgtctgagaat
aatcagtgtgctgcattcgagcccaagaacagagagttgtgtgcgtgttcatccaagact
aatagacattgcacagaaaatgacttggaaagtttcagaaactcaaagtcacatgaagct
aaaatcatttcagagttgaacacagaaactgaagacagtgagctagaaacacagtacttc
cgaaatatgttcagacattcaaaaagactgtcatttacccttcatcctagtccagtgaag
gaatctgtgactgaaagcactgcttctgaaactctaaggaaatcaggtgctagcagtgta
gaatataggcataacaatagtgacttaaaaaatgaacctccatatgttaaaaaaaccgtg
ggcctggatgaggtttgtgagagagatgagcctaaaacatgtgaatctgctaaaggtatt
tctgggcgtagtccaggaattcacttttccagggacaccgaatgtggacatgttagtgac
gatggcaagaatatttcacaagttccagatcaagtgcagttattctcaccaccaagagta
gccactgccaagattaagagtaggagcaggagcagactgcaaaaacgaaggcaaccaaag
gaaaagagaatttcacctgaaatggtgatagaaagtcaattaagtcagaacaaaagtaac
agaagcctaggagaccagagaaatatagaagagcgaatttcccaaagaactgatttaagc
acaattaatgaaacaggaagcaatcaaggagtaaaagctgaagaagctgaaaacaaaggg
ccagtattaaattttcagcccaagccagtgctggtatatcctgtagtttgtcaacaaagc
cctgctgaatttagctgcaaagtaattgaaaagaacggttatgaaggggaatgcaaacaa
gtaaagagtgataaagaacaagtatcccaaattgccagcataggtgtgcctgagtgctta
atttcagaggaggctctggaacagcccactgaaggtactagtggttttccattgctgtct
gagacccctgatggcttattgtgctctgctgatgacattaaagagaacataagcatttgt
gaaattgataggaaagaaatttctgcggtatttgttaaaacaggtgagagagcctcgtta
agagaactggacagtggcagcagtagttctaagtctaggtctcaaaactttgttcgggaa
cccagaagaccagcctggaaattgcagtcctccgaggaggattctagtgaagatgaagaa
ctaccttgctttcaggcattaatatttggcaaattagtaagcacaccattgcagcctaca
gaacagatcatgtctacagtagagtcttcatcaccggaagagattctagcattgctgaac
agtagcagtggcaataataaagctgtacagaaatcgcctggagtcatcttgagagataca
tgtgtttctccaagccaagagtcagaatgctcagttaacttattttcttcccagtccaac
atgtcagaagattcaaccaatagactacaagagctgaagaagcccataacactagctcct
tgttccaaagaaatgagcagtttcagtggaagcagagaagctagtccaaatggtaatgaa
gagctgacaggaagaaaaactgatttggaagatggacaccaacaagaccagaatgtgcaa
ccaaatttaggtgaagcatccggatatgacagtgaagccagtcaccaaggagattcttct
gggctgtcctcccagggtgagatccttaccacacagcagaaggatgccatgcaaaacaac
ttaaaagaacttcagcaggaaatggctgtacttgaggccgtgctggaagagcatggaagc
cagggctttgaattcccagccccacacagtgaactgcctccttccagagtggaaggaaca
ctcgcagtgggacaaacgagaccagctagaggaacagcattaatttcagaagtaaatctt
gaaaatcacaaaatcagcagttcaaagggactttcagctgatgggttccatgtaatgcca
agtgatcattccaacacaaaaaataaagagctagaagaagaaggtttgaggtcgcctgct
ttacagctttcccatcctaaatcccatctttttaaaaaagaagctctggagcaaggccac
tggtgcccgagcctttggaaagccaaaactcgctctcaggagggcacatttcagcgggtt
ggtgcggcagtgctgctggaacaagaggcaatgaaaccatgtaatcggtatagacttgaa
tcagaaaatgccgctgagcaggaatttggaacaaagctaaacactgcagctgttccgtgt
gggaatgagagcaggactccaaacagctctcccttgaaattttctgaaagacttacaaac
tgtcaaactgcagaatcaacaaatagtgctgccatatcgtggaatgctaataatgggaag
agcgctcagggatgtaagcaggagagaagggcattttcctctgcatctgctctgcacact
ggagttgtaaaagaaaatgccaaaagctcagttgtgacctgtaggagacaaatgtcaatt
gtggcatcaggtctgaaccagagtgagcttttattggtgcagaagtttgccaggaaaacc
cagagcactttatctaatcaaattactgaaggaacaacccatgtcataatgaaaacagat
atggagctagtttgtgagcggacactgaagtactttctgggcattgcaggaagaaaatgg
gtagttagctatgaatggattgttcagtcttttaaggaaggaaagatacttgatgagtac
gactttgaagtgagaggagacgtgatcaatgggagaaaccaccaaggccctaagagagct
agacgatcccagactggaaagctcttcaaagactttgagatctgttgctatggaccattc
accgatatgcgcacaggtgatctagagtggatggtggagctttgtggcgcctcagtggtg
aagcagcctcacctgttcacacacaaagctaactctactactgtaatagttgtacagcct
gatgcttggctcgaaaacacagggtacagagcaatccctcagaagtgtactgccatggtg
acccgagagtgggttttagacagcgttgcatgctatgagtgccaggagtttgatacctac
cttgtgtcccagtcatga
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integrated database retrieval system
