Caretta caretta (Loggerhead turtle): 125627815
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Entry
125627815 CDS
T09292
Name
(RefSeq) hepatic lectin-like
KO
K06563
C-type lectin domain family 4 member L/M
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay03260
Virion - Human immunodeficiency virus
ccay03264
Virion - Flavivirus and Alphavirus
ccay03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ccay03273
Virion - Lassa virus and SFTS virus
ccay04145
Phagosome
ccay04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03260 Virion - Human immunodeficiency virus
125627815
03264 Virion - Flavivirus and Alphavirus
125627815
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
125627815
03273 Virion - Lassa virus and SFTS virus
125627815
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125627815
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125627815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125627815
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccay04054
]
125627815
04090 CD molecules [BR:
ccay04090
]
125627815
04091 Lectins [BR:
ccay04091
]
125627815
Membrane trafficking [BR:
ccay04131
]
Endocytosis
Phagocytosis
C-lectin receptors
125627815
Pattern recognition receptors [BR:
ccay04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
125627815
CD molecules [BR:
ccay04090
]
Proteins
125627815
Lectins [BR:
ccay04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
125627815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Lectin_N
HemY_N
DUF6377
Motif
Other DBs
NCBI-GeneID:
125627815
NCBI-ProteinID:
XP_048688284
LinkDB
All DBs
Position
26:12888254..12894068
Genome browser
AA seq
208 aa
AA seq
DB search
MDKERLQDELRIFRGKNFLRQKLRSSLTVYVLLALSYLLIVILFVVSLSRVSMLSSQLNE
MRKELKRNNSSNDFKLFPCGPEAREWEYFSGKCYYFSLHATSWQRAKELCEEEHSFLAII
NSHAKQNFIMYRTRNQRFWIGLSDRNAEGEWKWIDGSDSTTGFTYWKEGEPNNSDQNEDC
AHVWTYGEWNDVHCTYECYYICEKPAPP
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggaaaggcttcaagatgagctgcgcatttttagaggtaagaacttcctccgg
cagaagctgagatcctccctcacagtctacgtgctgctggcactttcttacctgctgatt
gtcatcctgtttgtggtgtcgctctccagagtttcaatgctctcttcccaacttaatgaa
atgcgcaaggagctgaaacggaataactccagcaacgatttcaaattgttcccgtgtgga
cctgaggcccgggaatgggaatacttcagcgggaaatgttactatttctccttgcatgcc
acatcttggcagagggcgaaggagctgtgtgaggaggagcattcgttcctggccatcatt
aacagccatgccaagcagaattttatcatgtacaggacacgcaaccagcgcttttggatc
ggcctctcagaccggaatgcagaaggggagtggaaatggatcgacgggagcgactccaca
accggtttcacgtactggaaggagggggagcccaacaacagtgaccagaacgaggactgt
gcacacgtctggacctatggggagtggaacgacgtgcattgcacatacgagtgctattac
atctgtgaaaagcctgcacctccgtga
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integrated database retrieval system