Caretta caretta (Loggerhead turtle): 125628447
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Entry
125628447 CDS
T09292
Symbol
TRPM4
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 4
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125628447 (TRPM4)
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125628447 (TRPM4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
125628447
NCBI-ProteinID:
XP_048689443
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Position
27:complement(3006275..3037378)
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AA seq
1232 aa
AA seq
DB search
MGRDKQRDQAWIPKRFKKKTCTTYIEDPRDAGTPPRCQCGSPRAEHVSVAVEDAFGSAIV
SKWDSAQHTTEGPTDAFGELEFVGAGGKSSKFIRLSDSSDPALAYNLVTEHWKTSPPNLV
VSVVGGDGEAPVRAWLRDLLRKGLVKAAQSTGAWIMTGGLQAGIGRHVGEAVRDHATAST
SPCTRVVAMGVAPWGIVANREALVNPKGSFPAHYWWVPPAGTACPLDSNHSLFFLVDDGS
RGRPGGESRFRAHLEKHIAQQRVGAGGTGSIEIPVLVMVIGGNASMVTRVREAAEADIPC
LLVGGSGGAADCLAQILQDVQPGQESRVLIQEKLQGRFPPADVPGLAEQVEEILALRDLV
TVYSDEEGLEEFETVLLKALVRGGHLTGEATQYLDELRLAVAWNRVDIARSELFRGDIHW
EPQLLEEPMRDALLGDRPALVRLFVENGLDLGKFLTWGRLGELYRGIPEASLLHQLLARR
QGGPEPPHYQLVERPPDCPLTQVARLLRELLGDVCAPLLCQAAPPWTPRELGYKKGPLLD
GDPPYRDQCTRNPWTDLFIWAVLLNRGEMATYCWEMAPDAVGALVGARILRELSHLESDA
QEAVDMKELAMKFQTLAIGVFGECYGNSESRASQLLVRRSTLWGGATCLQLAWLAEARCF
FAHDGVQALLTQNWWGEMERSTPVWKLLLTFFCPPXIFTNLITFRAMEEDLQQEKPHTLE
NLDADGKCPVEEILMGSEQTRSWSYTSTSTHPAGLGLALGLAPVLGAPVTAFLGNVVMYL
LFLLLFSYVLLLDFPRPPPEGPHAAEVLLYAWVFTLLCEELRQGCFTGSRPLAQRARAYL
QDPWNQFDLTALGLFLLGAVCRMFQGTYPLGRTVLCLDFMVFTLRLIHIFAVNKQLGPKM
IIAGKMMKDVFLFLFFLAVWLVAYGVTTEGLLHPSDKRLAWIFRRVFYRPYLQIFGQIPL
NEIDAQIAGSNCTDDSGAKEGTPCMNTYANWLVLVLLVIFLLVANILLLNLLIAMFSYTF
AKVQGNSDTYWKSQRYSLILEYHNRPALAPPFIIISHLRQLLRHRARGGSAKSRHFARDL
SPEQDAQLLTWEAVQKENYLVALGRQKRDSDTERLRRTSQKVDQALKQLAEVREQERRLK
TLETQMEKCTSALSWMVDTLAQSDLGKNRPAPPTDPPTPASEDISCGEWTPSCEHRHPGT
MDSPPLPPRHCEPRHPGTMDCPGGLEFRRSLL
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggacaaacagcgagatcaggcctggatccccaaacgcttcaagaagaaaacc
tgcacaacctacattgaggatccacgggacgcgggcaccccacctcggtgccagtgcggg
agcccccgggccgagcacgtctctgtggccgtggaagacgccttcggctcggccatcgtc
agcaaatgggactcggcccagcacaccacggaggggcccacggacgccttcggggagttg
gagttcgtgggggccggtggcaaatccagcaagttcatccgcctgtcggactcctcggac
cctgcgctcgcctacaacctggtgaccgaacactggaaaacctcccctcccaacctcgtg
gtgtcagttgtcgggggtgacggggaggcccccgtccgggcctggctccgggacctgctg
cgtaaggggttggtgaaggcggcgcaaagcacaggtgcatggatcatgaccggggggctg
caggccggcattgggcgacatgtcggggaggccgtccgggaccatgccacagccagcacc
agcccctgcacccgcgtggtggccatgggcgtcgcgccctggggcatcgttgccaaccgc
gaggcccttgtcaatcccaagggctcgttccccgcccactactggtgggtcccccccgcg
ggcaccgcctgccccctggacagtaaccactcgctcttcttcctggtggacgacggttcc
cgggggcgccccgggggcgagagccgcttccgcgcccacctggagaaacacatcgcccag
cagagggtgggcgccgggggaactggcagcatcgagatccccgtgctggtaatggtcatc
gggggcaacgcgtcaatggtcacgcgcgtgcgagaggccgctgaggcggacatcccctgc
ctcctggtggggggctccgggggtgcggccgactgtctggcccagatcctgcaggacgtg
cagccgggccaggagagccgggtgctgatccaggagaagctgcagggacgcttcccgccc
gccgacgtgccaggcctggccgagcaggtggaggagatcctggcgctgcgggacctggtc
actgtctattcggatgaggaggggctggaggagtttgagacggtgctgctcaaagctctg
gtcagaggcggccacctgaccggtgaggccacccagtacctggacgagctgcgcctggct
gtggcctggaaccgcgtggacatcgcccgctctgagctcttccgtggagacatccattgg
gagccccagctgctggaggagcccatgcgggacgcgctgctgggggaccgcccggccctg
gtgcgtctgttcgtggagaacgggctggacctgggcaagttcctgacctgggggcgcctg
ggggagctgtaccgggggatccccgaggcctcgctgctgcaccagctgctggcgcggcgc
cagggggggcccgagcccccccactaccagcttgtggagcgcccccccgactgccccctg
acccaggtggcccgcctgctccgcgagctgctgggcgacgtctgcgccccccttctatgc
caggctgcacccccctggactccaagggagctggggtataagaagggtcccctgctggac
ggggaccccccctaccgcgaccagtgcacccggaacccctggactgacctcttcatctgg
gctgtgctgctcaaccggggcgagatggccacgtactgctgggagatggccccggacgcg
gtgggggcgctggtgggggcacggatcctgcgggaactctcccacctcgaatcggatgcg
caggaggccgtggacatgaaggagctggccatgaagttccagaccttggccatcggcgtg
ttcggcgagtgctatgggaacagtgagtctcgggcctctcagctcctcgtgcgtcgctcc
accctctggggcggcgccacctgcctgcagctcgcctggctggccgaggcccggtgcttc
tttgcccacgacggggtgcaggcgctgctgacccagaactggtggggcgagatggaaagg
tccacgcccgtctggaaactcctcctcaccttcttctgcccccccntcattttcaccaac
ctcatcaccttcagggcgatggaggaggatctgcagcaggagaagccccacaccctggag
aacctggatgccgatgggaaatgccccgtggaggagatcctcatgggatcagagcagacc
cgctcctggtcctacacttccaccagcacacacccagccgggctgggcctggctctgggg
ctggcgccggttctgggggcgccggtgacagccttcctgggcaacgtggtgatgtacctg
ctcttcctgctgctcttctcctacgtgctgctgctggacttcccgcgccccccgcccgaa
ggcccccacgccgccgaggtcctgctctacgcctgggtcttcaccctgctgtgcgaggag
ctccgccagggctgcttcaccgggagccggccgctggcccagcgcgcccgcgcctacctg
caggacccctggaaccagttcgacctcaccgccctggggctcttcctgctgggggccgtc
tgccggatgtttcaagggacctacccgctggggcgcaccgtgctctgcctggacttcatg
gtcttcaccctacgtctcatccacatcttcgccgtcaacaaacagctgggccccaagatg
atcatcgcgggcaagatgatgaaggacgtcttcctcttcctcttcttcctggccgtctgg
ctggtggcctacggggtgacgaccgaggggctgctgcaccccagtgacaagcgcctggcc
tggatcttccgccgtgtcttctaccggccctacctgcagatcttcggccagatcccgctc
aacgagatcgatgcgcagatcgcggggtcgaactgcacggacgactcgggggcgaaggag
ggcacgccctgcatgaacacttacgccaactggctggtcctggttctcctcgtcatcttc
ctcctcgtcgccaacatcctgctcctcaacctgctcattgccatgttcagttacaccttt
gccaaggtgcagggcaacagcgacacctactggaagtcgcagcgttacagcctgatcctg
gagtatcacaaccggccggccctggccccccccttcatcatcatcagccacctgcgccag
ctgctgcgccaccgggcccgggggggctctgccaagagccgccactttgcgcgggacctg
tccccggagcaggacgcccagctgctcacctgggaggccgtgcagaaggagaattacctg
gtagccctgggccgccagaaacgggacagcgacaccgagcggctccggcggacgtctcag
aaggtcgaccaggccttgaagcaattggctgaggtccgggagcaggagcgacggctcaag
accctggagacccagatggagaagtgcaccagcgccctctcctggatggtggacaccctg
gctcagagcgacctgggaaagaaccgccccgccccccccactgaccccccgaccccagcg
agcgaggacatcagctgcggagaatggacacccagctgcgagcacaggcatccgggcacc
atggactccccccctctccccccccgccactgtgaacccaggcatccgggcaccatggac
tgtcctggggggctggagttcaggagatccctgctgtga
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