Caretta caretta (Loggerhead turtle): 125628864
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Entry
125628864 CDS
T09292
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccay04040
]
125628864
Ion channels [BR:
ccay04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125628864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
125628864
NCBI-ProteinID:
XP_048690054
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MGENLHFLQTSLPSGVDPGAVEEILALRDLVTVYSDEEGLEEFETVLLKALVRGGHLTGE
ATQYLDELRLAVAWNRVDIARSELFRGDIHWEPQLLEEPMRDALLGDRPALVRLFVENGL
DLGKFLTWGRLGELYRGIPEASLLHQLLARRQGGPEPPHYQLWSAPPDCPLTQVARLLRE
LLGDVCAPFYARLHPLDSKGAGKKGPLLDGDPPYRDQCTRNPWTDLFIWAVLLNRGEMAT
YCWEMAPDAVGGALVGARILRELSHLESDAQEAVDMKELAMKFQTLAIGVFGECYGNSES
RASQLLVRRSHLWGGATCLQLAWLAEARCFFAHDGVQALLTQNWWGEMERSTPVWKLLLT
FFCPPLIFTNLITFRAMEEDLQQEKPHTLENLDADGKCPVEEILMGSASSLSSPRRPGWA
WLWGWRRFWGAPVTAFLGNVVMYLLFLLLFSYVLLLDFPRPPPEGPHAAEVLLYAWVFTL
LCEELRQGCFTGSRPLAQRARAYLQDPWNQFDLTALGLFLLGAVCRMFQGTYPLGRTVLC
LDFMVFTLRLIHIFAVNKQLGPKMIIAGKMMKDVFLFLFFLAVWLVAYGVTTEGLLHPSD
KRLAWIFRRVFYRPYLQIFGQIPLNEIDAQIAGSNCTDDSGAKEGTPCMNTYANWLVLVL
LVIFLLVANILLLNLLIAMFSYTFAKVQGNSDTYWKSQRYSLILEYHNRPALAPPSSSSA
TCASCSRDLSPEQDAQLLTWEAVQKENYLVALGRQKRDSDTERLRRTSQKVDQALKQLAE
VREQERRLKTLETQMEKCTSALSWMVDTLAQSDLGKNRPAPPPLKSD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaatcttcacttcttacagacctccctccccagtggagtggatcctggcgct
gtggaggagatcctggcgctgcgggacctggtcactgtctattcggatgaggaggggctg
gaggagtttgagacggtgctgctcaaagctctggtcagaggcggccacctgaccggtgag
gccacccagtacctggacgagctgcgcctggctgtggcctggaaccgcgtggacatcgcc
cgctctgagctcttccgtggagacatccattgggagccccagctgctggaggagcccatg
cgggacgcgctgctgggggaccgcccggccctggtgcgtctgttcgtggagaacgggctg
gacctgggcaagttcctgacctgggggcgcctgggggagctgtaccgggggatccccgag
gcctcgctgctgcaccagctgctggcgcggcgccagggggggcccgagcccccccactac
cagttgtggagcgccccccccgactgccccctgacccaggtggcccgcctgctccgcgag
ctgctgggcgacgtctgcgcccccttctatgccaggctgcaccccctggactccaaggga
gctgggaagaagggtcccctgctggacggggaccccccctaccgcgaccagtgcacccgg
aacccctggactgacctcttcatctgggctgtgctgctcaaccggggcgagatggccacg
tactgctgggagatggccccggacgcggtggggggggcgctggtgggggcacggatcctg
cgggaactctcccacctcgaatcggatgcgcaggaggccgtggacatgaaggagctggcc
atgaagttccagaccttggccatcggcgtgttcggcgagtgctatgggaacagtgagtct
cgggcctctcagctcctcgtgcgtcgctcccacctctggggcggcgccacctgcctgcag
ctcgcctggctggccgaggcccggtgcttctttgcccacgacggggtgcaggcgctgctg
acccagaactggtggggcgagatggaaaggtccacgcccgtctggaaactcctcctcacc
ttcttctgcccccccctcattttcaccaacctcatcaccttcagggcgatggaggaggat
ctgcagcaggagaagccccacaccctggagaacctggatgccgacgggaaatgccccgtg
gaggagatcctcatggggtcggcgtcctcgctgagctccccccggcggccgggctgggcc
tggctctggggctggcgccggttctggggggcgccggtgacagccttcctgggcaacgtg
gtgatgtacctgctcttcctgctgctcttctcctacgtgctgctgctggacttcccgcgc
cccccgcccgaaggcccccacgccgccgaggtcctgctctacgcctgggtcttcaccctg
ctgtgcgaggagctccgccagggctgcttcaccgggagccggccgctggcccagcgcgcc
cgcgcctacctgcaggacccctggaaccagttcgacctcaccgccctggggctcttcctg
ctgggggccgtctgccggatgtttcaagggacctacccgctggggcgcaccgtgctctgc
ctggacttcatggtcttcaccctacgtctcatccacatcttcgccgtcaacaaacagctg
ggccccaagatgatcatcgcgggcaagatgatgaaggacgtcttcctcttcctcttcttc
ctggccgtctggctggtggcctacggggtgacgaccgaggggctgctgcaccccagtgac
aagcgcctggcctggatcttccgccgtgtcttctaccggccctacctgcagatcttcggc
cagatcccgctcaacgagatcgatgcgcagatcgcggggtcgaactgcacggacgactcg
ggggcgaaggagggcacgccctgcatgaacacttacgccaactggctggtcctggttctc
ctcgtcatcttcctcctcgtcgccaacatcctgctcctcaacctgctcattgccatgttc
agttacacctttgccaaggtgcagggcaacagcgacacctactggaagtcgcagcgttac
agcctgatcctggagtatcacaaccggccggccctggcccccccttcatcatcatcagcc
acctgcgccagctgctcgcgggacctgtccccggagcaggacgcccagctgctcacctgg
gaggccgtgcagaaggagaattacctggtagccctgggccgccagaaacgggacagcgac
accgaacggctccggcggacgtctcagaaggtcgaccaggccttgaagcaattggctgag
gtccgggagcaggagcgacggctcaagaccctggagacccagatggagaagtgcaccagc
gccctctcctggatggtggacaccctggctcagagcgacctgggaaagaaccgccccgcc
ccccccccactcaaatcagactga
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