Caretta caretta (Loggerhead turtle): 125630565
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Entry
125630565 CDS
T09292
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccay03000
]
125630565 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccay03310
]
125630565 (NR1H4)
Transcription factors [BR:
ccay03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125630565 (NR1H4)
Nuclear receptors [BR:
ccay03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125630565 (NR1H4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125630565
NCBI-ProteinID:
XP_048692678
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All DBs
Position
1:complement(260082341..260143498)
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AA seq
455 aa
AA seq
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MEMVGMKTANGVLTEAMSSPVQEPDVSAYTQYSSMPFPPVQPQISSPPYYSNLGFYPQQP
EEWYSPGMYELRRIPCENFFTRETELADIPVAKKSRLGHSTGRVKGEELCVVCGDKASGY
HYNALTCEGCKGFFRRSITKNAVYKCKNGGNCEMDMYMRRKCQECRLRKCKQMGMLAECL
LTEIQCKSKRLRKHVKQPPDQTANEDNEGADLKQVTSTTKIYREKVELTPEQQNLLHYIM
DSYSKQRIPQEVSKKLLQEEFSAEENFLILTEMATSHVQVLVEFTKKLPGFQTLDHEDQI
ALLKGSAVEAMFLRSAEIFNRKLPVGDADLLEERIRKSGIADDYITPMFGFYKSVGELKM
TEEEYALLTAIVILTPDRQYIKDRESVERLQEPLLEVLQKLCKLYHTDNPQHFACLLGRL
TELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDVQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtcggaatgaagacggctaacggtgttcttacagaggcaatgagttctcca
gtacaagaaccagatgtgtccgcttatacacagtacagcagtatgccgttccccccagtt
cagcctcagatttcatcaccaccttattattccaaccttggcttttacccccagcagcct
gaagaatggtattcccctggaatgtatgaactcaggagaatcccctgtgagaactttttc
acaagagagacagaactagcggatatacctgtagccaagaagtctagactgggccactcc
acaggaagagtgaaaggagaagagctatgtgttgtctgtggtgacaaagcatctggatac
cactataatgctctgacttgtgaggggtgcaaaggcttcttcagaagaagtatcactaaa
aatgctgtatacaagtgtaaaaatggaggcaattgtgagatggacatgtacatgagaaga
aagtgccaggagtgccgcctgcggaaatgcaaacaaatggggatgttggctgaatgtttg
ttaacagaaatacaatgcaagtcaaaacgtctaagaaaacatgtgaaacagccgcctgat
cagacagccaacgaagataatgagggagcggacctgaagcaagtgacatctacaactaaa
atatacagggagaaagtagaacttaccccagaacagcagaaccttcttcattacatcatg
gattcctatagtaaacaaagaattcctcaagaggtatcaaaaaaacttttacaagaggaa
ttcagtgctgaagaaaattttctcatcttaacagaaatggctaccagtcatgttcaggtt
cttgtggaattcaccaaaaagttaccaggctttcaaacccttgatcatgaagatcagatt
gctttactgaagggctcagcagtagaagccatgttccttcgttcagctgagatctttaat
aggaaacttcctgtaggagatgctgacctcttagaagaaagaattcgcaaaagcggtatc
gctgatgattacataacccccatgtttggtttttataaaagcgttggagaactgaagatg
acagaagaagagtatgctctacttacagcaatagttatcttaactccagatcgacaatac
ataaaggatagagagtctgtggaaagacttcaagaaccactgcttgaagttttacaaaaa
ctctgcaagctttaccacactgataaccctcaacattttgcatgtcttctgggccgtctt
acagaattacggacatttaaccatcatcatgcagagatgctgatgtcatggagagtgaat
gatcataaatttactcctcttctctgtgaaatctgggatgtgcagtga
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