Caretta caretta (Loggerhead turtle): 125637332
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Entry
125637332 CDS
T09292
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay00280
Valine, leucine and isoleucine degradation
ccay00650
Butanoate metabolism
ccay00900
Terpenoid backbone biosynthesis
ccay01100
Metabolic pathways
ccay03320
PPAR signaling pathway
Module
ccay_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
125637332 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
125637332 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125637332 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125637332 (HMGCS1)
Enzymes [BR:
ccay01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
125637332 (HMGCS1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
125637332
NCBI-ProteinID:
XP_048707633
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Position
5:complement(28936701..28967630)
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AA seq
559 aa
AA seq
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MLPRGQSAVLGLSNSGLDDLGQESSLLCLSFSVNSTTMPGSLPVNAEACWPKDVGIVALE
IYFPSQYVDQTELETFDGVDAGKYTIGLGQSKMGFCSDREDINSLCLTVVQKLMERNSLS
YDCIGRLEVGTETIIDKSKSVKTVLMQLFEDSGNTDVEGIDTTNACYGGTAAIFNAVNWV
ESSSWDGRYALVVAGDIAVYATGNARPTGGAGAVAMLIGPNAPLIFERGLRGTHMQHAYD
FYKPDMVSEYPIVDGKLSIQCYLSALDRCYFVYRNKIRAQWQKEGSDREFTLNDFGFMIF
HSPYCKLVQKSVARLLLNDFLSDQNSKTENGIYSGLEAFRDVKLEDTYFDRDVEKAFMKA
SAELFNQKTKASLLVSSQNGNMYTPSVYGCLASLLAQYSPQQLAGQRIGVFSYGSGFAAT
LYSIRVTQDATPGSSLDKITASLSDLKTRLDSRKCIAPDVFAENMKIRQETHHLANYIPQ
CSVNDLFEGTWYLMRVDEKHRRTYARRPVLGDGPLEAGADVVHSSIVHELIPSPAKKVPR
IPATKESEAVAVSVANGEH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctcgtgggcagagcgctgtgcttggactcagcaactctgggctggatgacctt
gggcaagaaagttcactactctgccttagtttctctgtaaactctacaacaatgcctggg
tctcttcctgtgaatgctgaagcctgttggccaaaagatgtgggaattgttgccttggag
atctattttccttctcagtatgttgaccagacagaattggaaacatttgatggtgtggat
gctgggaagtacaccattggcttgggtcaatcgaagatgggattctgctcagatagagag
gatatcaactcactctgcttgactgtggtacagaagcttatggagaggaacagtctctcc
tatgattgcattgggagattagaagttggaacagagacaatcattgacaagtcaaaatct
gtaaagactgtcctgatgcagctctttgaggattctggtaatacagatgtagaagggatt
gacacaacaaatgcatgctatggaggcactgctgctatctttaatgctgttaactgggtt
gagtccagttcttgggatggtcgttatgcgcttgttgttgctggagacatagctgtgtat
gccactggaaatgccaggccaaccggtggagctggtgctgttgctatgttaattggtcca
aatgctcctttaatttttgagagaggactgcgtgggacccatatgcaacatgcctatgac
ttttataagccagatatggtatctgaatatcctatagttgatggtaaactatctattcag
tgctacctcagtgcattagatcgctgctattttgtctaccgcaacaaaatccgtgctcag
tggcaaaaagaaggaagtgacagagagtttaccttgaatgactttggcttcatgatcttc
cattctccatactgtaaacttgtacagaaatctgtggctcgactgttgttgaatgacttt
cttagtgaccagaactctaaaacagaaaatggtatctatagtggcttggaagcttttagg
gatgtaaaactggaggatacctactttgacagagatgtggagaaggcctttatgaaagct
agtgctgaactctttaatcagaaaaccaaagcttctttacttgtatccagtcaaaatgga
aacatgtacaccccttcagtctatggctgccttgcttctcttctagcacagtactcccca
cagcagctagcaggacaaagaattggtgtgttctcctatggctctggttttgctgctaca
ctctactccattagagttacacaggatgccacaccaggttcttctctggataaaataact
gctagcctatctgatctgaaaacaagacttgactcaagaaagtgtattgcaccggatgtc
tttgctgaaaacatgaagattagacaggaaacgcatcacttggccaactacattccacag
tgttcagtgaatgatctctttgagggaacgtggtatctaatgcgagtggatgaaaaacac
agaagaacttatgctcgacgtccagtgctgggtgatgggcctttagaagcaggagcagat
gttgtccattcaagcatagttcatgagcttatcccaagccctgctaagaaagtgccaaga
atccctgcaacaaaagaatctgaagctgttgctgtctctgttgccaatggagagcattaa
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