Caretta caretta (Loggerhead turtle): 125638256
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Entry
125638256 CDS
T09292
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 2-like isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125638256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125638256
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccay04054
]
125638256
Membrane trafficking [BR:
ccay04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125638256
Pattern recognition receptors [BR:
ccay04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125638256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
PYRIN
NPH3
Motif
Other DBs
NCBI-GeneID:
125638256
NCBI-ProteinID:
XP_048709732
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All DBs
Position
6:3272496..3297328
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AA seq
539 aa
AA seq
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MEAPGRSDLLRKLKALGKEELEGFKDKLSEVLLERGSEPIPVTPADPAALTDLLLRHCRG
DSKVFLKVLEDVEARLRKVSPTASSHPQQAQKPSTCTKAGDSGPKSHFMHSGDEIPPGEG
GTLASAIAFMKRHLSFTGSKAEAAGKQSRKEDPTGDSWGTDKCKLCPREEDPPEEIHPET
VRGTDGNQEMYRVHLPGAGSFRCSETELGFEARAAVTVQYRYGFWDQHLSVWSTPKWMIA
GPLFSIQAEPAGAVAAIHLPHFLCLRGADTSRMQIAHFIEEGMTLEKPMQVRPFHAVLEN
PSFSLYGVVWGNRSKPPILIHSIVLLYWALKMAKTTLHLYIIPNDHSRFKAVDDYEKKCP
SRLVSTSLQTHKPLTFDSHYVVSSQSNIEVTPKELKFCNIQAECLQSFMEIYTKDIQGGL
EFSLVEKINKGPIWEAHVRPEDVTLSVSSAQTQTDEHFVNQHREQLIQRVMAVDSILDSL
YGPVLDLEQIQSIRAERSSVEKMRKLYELVPKWDKDCKDRLYQALKEKHRPLVEELEGI
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccctgggagaagtgatctgctgaggaagctgaaagccctgggcaaggaggag
ttggaggggttcaaggataagctgagtgaagtcctgctggagaggggatctgagcccatc
cccgtaacaccagctgacccagcagccctaaccgacctgctgctcagacactgcagaggg
gactcaaaagtgtttctgaaagtcctggaagatgttgaagccagactccggaaagtctct
cccacagcttccagccacccacaacaagcgcagaagccatccacttgcactaaagcagga
gattcaggaccaaagagccacttcatgcattcaggcgatgagattccccctggtgaagga
gggacactagcatctgcgattgccttcatgaagaggcatctttccttcactggctccaag
gccgaagctgcaggaaaacaaagcaggaaggaggatcccactggggacagctggggaacg
gacaaatgcaaactgtgtcccagggaggaggatcctccagaagaaatacaccctgagact
gttcggggcacagatgggaaccaggagatgtacagggttcacctccccggggcaggctca
ttccgttgctctgaaaccgaactggggtttgaggcgagggcagccgttactgtccaatac
agatacggcttctgggatcagcatctgagtgtgtggagcactcctaaatggatgatcgct
ggccctctgttcagcatccaggcagaaccggccggggccgtggcagccattcacctcccg
cacttcctgtgtctcagaggggctgacacctcccggatgcaaatcgcccatttcatcgag
gaggggatgaccctggagaagccaatgcaagtgaggccattccatgctgtgctggagaac
cccagcttctccctgtatggagtggtctgggggaatcgctccaaaccaccaattctgatc
cactccattgtactgctctactgggcactcaagatggcaaagacgactcttcacctctac
atcatccctaacgaccactcccggttcaaggccgttgatgactatgaaaagaagtgccca
tcaaggctggtgtcgacatctcttcagacccataagcccctgacctttgattctcattat
gtggtgtccagtcaatcaaacatagaggtgacacccaaggagctgaagttttgtaacatc
caagcagagtgtctgcagtcgtttatggaaatctacaccaaggacattcaggggggactg
gagttcagcttggtagagaaaatcaacaaggggcccatctgggaggcacatgtgagacca
gaggatgtgacgctttctgtgtcatctgcccaaactcaaacagatgagcattttgtcaac
cagcaccgagaacagttgatccagcgagtgatggcagtggatagcatcctggattcgttg
tatggccccgttctggacctggagcaaatccagagcatcagagcagagagatccagcgtg
gagaagatgaggaagctgtacgagctagtgcctaaatgggacaaggactgcaaggaccgg
ctctaccaggcactgaaggagaagcacagacctctagtggaagagcttgaggggatatag
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