Caretta caretta (Loggerhead turtle): 125638326
Help
Entry
125638326 CDS
T09292
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04620
Toll-like receptor signaling pathway
ccay04621
NOD-like receptor signaling pathway
ccay04622
RIG-I-like receptor signaling pathway
ccay05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125638326 (TRAF3)
04621 NOD-like receptor signaling pathway
125638326 (TRAF3)
04622 RIG-I-like receptor signaling pathway
125638326 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125638326 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
ATG16
Cast
zf-C3HC4_2
MPS2
Sina_ZnF
FliJ
CEP104_ZnF
zf-RING_6
Spc29
Tropomyosin
zf-C3HC4_4
zf-RING_UBOX
KxDL
T3SSipB
ADIP
DUF1664
LMBR1
Crescentin
Motif
Other DBs
NCBI-GeneID:
125638326
NCBI-ProteinID:
XP_048709866
EnsemblRapid:
ENSCECG00000017682
LinkDB
All DBs
Position
6:105723215..105812226
Genome browser
AA seq
566 aa
AA seq
DB search
MDTSKKTEPPVSVEMVQQRANPDHAPGSIYVPEQGGYKEKFVNTVEDKYKCEKCHLILCN
PKQTECGHRFCETCINALLSSSSPKCTACQENIVKDKVFKDNCCRRELLALQIYCRNENK
GCNELLMLAQLLTHLRNDCQFEELSCHRADCKEKILRKDLPDHVEKTCKYRETTCKYCKS
QVPMITLQKHEDTDCPSVAVSCPHKCSVTSLLRRELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKILHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIMKSSVESLQNRVS
ELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacacgagtaaaaagacagaaccccctgtgtctgtagaaatggtacaacaaagggcg
aaccctgatcacgctcctggatcaatttacgttccagaacaaggtggttacaaagagaaa
ttcgtaaatacagtggaggacaagtataaatgtgaaaagtgtcatctcatattgtgcaat
cctaaacagacggaatgtggacacagattctgtgaaacctgcattaatgcattgttaagt
tcttctagtccaaaatgtacagcgtgtcaagagaacatagttaaagataaggtatttaag
gataactgctgtaggagagagcttcttgcccttcagatatattgcagaaatgaaaacaaa
ggctgcaatgaactactaatgctggcacaactactgacgcatttgagaaatgactgtcag
tttgaagaactttcatgccaccgtgctgattgcaaggagaaaatactgcggaaggacttg
ccagaccatgtagaaaagacctgtaaatatcgggagactacatgtaaatactgtaaaagc
caagtcccaatgattacattacagaaacatgaagatacagactgtccctctgtcgcggtt
tcatgtcctcataaatgcagtgttacatcactcttgagaagggagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgtaaattta
ttgaaagaatggagtaattctctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcgagtg
atagacaatcaagcagagaaattgaaagaactggataaagagatccgccccttccgacag
aattgggaggaggcagacatcatgaagagcagtgtggagtccctccagaatagagtgagt
gaactggaaagtgttgataaaactgcaggacaaggagctcgaaatacagccgtactagag
acgcagctaagtagacacgatcaaatgctgagtgttcatgatattcggttggctgacatg
gacctccgattccaagtgttagaaacggccagttacaatggagtattaatttggaaaatt
cgagattataaacgtcggaaacaagaggctgtcatggggaagactctgtccttatacagc
cagcctttttatactggatactttggctataagatgtgtgccagagtttaccttaatgga
gatggcatgggaaaagggacgcacttgtcattgtttttcgtcataatgcgtggagaatat
gatgccttacttccttggccatttaaacagaaagtgactctgatgctaatggatcaggga
ccttctcgacgtcacttaggagatgctttcaagccagacccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaacagtt
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggatact
tcggatctaccagacccctga
DBGET
integrated database retrieval system
