Caretta caretta (Loggerhead turtle): 125638872
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Entry
125638872 CDS
T09292
Symbol
BDNF
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125638872 (BDNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccay04052
]
125638872 (BDNF)
Cytokines and neuropeptides [BR:
ccay04052
]
Cytokines
Growth factors (RTK binding)
125638872 (BDNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
125638872
NCBI-ProteinID:
XP_048711080
EnsemblRapid:
ENSCECG00000011978
LinkDB
All DBs
Position
6:37448797..37499948
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AA seq
254 aa
AA seq
DB search
MFHQVRRVMTILFLTMVISYFSCMKAAPMKEASVRGLGSLAYPGLRTHGTLESLSGPNTG
SRGLTSLAGTFEHVIEELLDEEQDIQPSEENKDADLYTSRVMLSSQVPLEPPLLFLLEEY
KNYLDAANMSMRVRRHSDPARRGELSVCDSTSEWVTAAEKKTAVDMSGATVTVLEKVPVP
KGQLKQYFYETKCNPKGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDNKKRVGWRFIRI
DTSCVCTLTIKRGR
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgttccaccaagtaagaagagtgatgaccatccttttccttactatggttatttcatac
ttcagttgcatgaaagctgcccctatgaaagaagcaagtgtcagaggactaggcagcttg
gcttacccaggtcttcggacccatgggactctggagagcctaagtgggcccaacactggt
tcaagaggactgacatcattggcaggcacttttgaacatgtcatagaggagcttctagat
gaggagcaggacatccagcccagtgaggaaaacaaggatgccgacttgtacacgtctcgg
gttatgctaagcagtcaagtgcctttggagcccccattgctctttctgcttgaggagtac
aaaaattacttggatgcagcaaatatgtccatgagggtccggcgccactctgaccctgct
cgccgtggggagctgagcgtgtgtgacagtactagtgagtgggtaacagcagcagagaaa
aagactgcagtggacatgtctggtgcaacggttacggtcctggaaaaagtcccagtaccc
aaaggccaactgaagcaatacttctatgagaccaaatgcaatcccaaaggttacacaaaa
gagggttgcaggggcatagacaagaggcattggaattcccagtgccgaactacccagtct
tatgtgcgagctctcaccatggataacaaaaagagagttggctggcggtttataagaata
gacacttcctgtgtatgtacattgaccattaaaaggggaagatag
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