Caretta caretta (Loggerhead turtle): 125639233
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Entry
125639233 CDS
T09292
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay02010
ABC transporters
ccay04146
Peroxisome
ccay04977
Vitamin digestion and absorption
ccay04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125639233 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125639233 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125639233 (ABCD4)
04980 Cobalamin transport and metabolism
125639233 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccay04131
]
125639233 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccay02000
]
125639233 (ABCD4)
Enzymes [BR:
ccay01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
125639233 (ABCD4)
Membrane trafficking [BR:
ccay04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125639233 (ABCD4)
Transporters [BR:
ccay02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
125639233 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
IRK
AAA_7
SbmA_BacA
AAA_22
AAA_29
FtsK_SpoIIIE
AAA_23
DEAD
T2SSE
Motif
Other DBs
NCBI-GeneID:
125639233
NCBI-ProteinID:
XP_048711907
LinkDB
All DBs
Position
6:complement(83462739..83498635)
Genome browser
AA seq
618 aa
AA seq
DB search
MAVGSATVGSAGSRRPQPQLDLQFLRRFGKIQAILFPRWSSQNVLMFLTLLSIALLEQLV
IYQVGLIPSQYYRVLGSKDFSGFKTLTAIAAILIVLNSTLKSLDQFICNLMYVSWRKTLT
EYLHGYYFQGQVYYTLNVLREDIDNPDQRISQDVERFCRQLSSMASKLLISPFTLGYYTY
QCFQSTGWLGPVSIFGYFVIGTVVNKVLMSPIVSKLVHQEKLEGDFRFKHMQIRVNAEPA
AFYRAGQVEHMRTDRRLQSLLQTQRELMGKELWLYIGINTFDYLGSILSYVVIAIPIFSG
VYGDLDPAQLSALVSKNAFVSIYLISCFSQLIDLSAILSDVAGYTHRIGELQETLLSLSR
KHRDCESEAKTNWDFDNGLGEQTVLGETAFLLERVSLSVPSSDKLLIKDLDLRISQGNNL
LIVGNTGTGKTSLLRVLGGLWESTRGNIHMLSCFGPHGVVFLPQRPFFTDGTLREQVIYP
LKKIYPVSGSADDERILHFLELAGLSDLLVRTGGLDQQVDWNWYDILSPGEMQRLSFARL
FYLQPRYAVLDEATSALTEEVENELYCTCAQLGMTLVSVGHRTSLEKFHSWILKLSGRGR
WELTRTERVRRLPASEGC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgggagcgcaacggtggggagcgccggcagccgcaggccccaaccccagctg
gacctacagttcctgcgacgcttcgggaagatccaggccatcttgtttcccagatggtcc
tcccagaatgtgctcatgttcctgaccctgctgagcattgccctgttggagcagttggtc
atttaccaggttggattgatccccagccagtactacagggtcctggggagcaaggacttc
tctgggttcaaaaccctgactgcgattgctgcgatactcatcgtactcaattccacgctg
aaaagcttggaccagtttatctgtaacctgatgtatgtgagctggaggaagactctcacc
gaataccttcatggctactatttccagggccaggtgtattacaccctgaacgtgctgcgt
gaggacatcgataatccagaccagcgaatcagtcaggatgtggagaggttctgcagacag
ctaagctccatggccagtaaactcctcatctctccttttacgctgggctactacacctat
cagtgctttcagagcactggctggctgggcccagtaagtatctttgggtattttgtcatt
gggactgttgttaacaaggtgctgatgagtcccattgtgtcgaaactggtgcatcaggag
aagctggagggggatttcaggttcaagcacatgcagattcgtgtaaatgcagagccagct
gctttctacagagctgggcaggtagagcatatgagaactgaccgccggctgcagagcctc
ctgcagacacagcgggagctgatgggtaaagagctgtggctctacattgggatcaacacc
tttgactatctgggcagcattctgagttacgtggtgattgccattcccatctttagtggt
gtctatggcgacctggatccagcacagctgagcgctctggtcagcaagaatgcctttgtc
tccatttacctgatcagctgcttcagccagctcatcgatctctctgccatcttgtctgac
gtggctggctacacacacaggattggggagctgcaggagacactgctgtctctctccagg
aaacaccgtgattgtgaatcagaagccaaaaccaactgggactttgacaatggtcttgga
gagcagactgtgctgggggagacagccttccttctggagcgagtgtctctctcggttcca
tcctcggacaagctgctcatcaaggacctcgacctacggatttcccaagggaacaatctg
ctgatcgtggggaacactggcacggggaagacgtcactcctgagggtccttggtggcctc
tgggagagcacacgggggaacatccacatgctgagctgctttggtccccatggggtggtg
ttcctgccacagagacctttcttcacagatggaaccctgcgagagcaggtgatttatcct
ctgaagaagatttatccagtttcagggtctgcagatgatgagaggatcctgcatttcctg
gagctggctgggctgtctgatttgttggtgcgcacagggggtctggaccagcaggtggat
tggaactggtatgacatcctgtccccaggggagatgcagagactctcatttgcaaggctc
ttctacctccagcccagatatgcagtgttggatgaagccaccagtgctctgacagaggag
gtggagaatgagctatactgcacctgcgctcagctggggatgacactagtcagtgtggga
catcgcaccagcctggaaaagtttcacagttggattttgaaactctccggaagaggaaga
tgggaactaacaagaaccgagagagtgaggcggctcccagccagtgagggatgctga
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