Caretta caretta (Loggerhead turtle): 125640028
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Entry
125640028 CDS
T09292
Symbol
PLXND1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
ccay
Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
125640028 (PLXND1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
PSI_PlexinA-B
TIG_plexin
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
125640028
NCBI-ProteinID:
XP_048714032
LinkDB
All DBs
Position
7:complement(19144395..19268765)
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AA seq
1934 aa
AA seq
DB search
MAPRERGAKGLAPLLLLLALLGSPNAGLEVQHKFLSPTLTNNFALDGLGSKIYLAAVNRL
YQLSGPNLTLEVEEQVGPVPDNPLCHAPQLPQASCEHPKVLTNNYNKILQPDPEQGIVVV
CGSIYQGFCQLRSMANISAVAVSFPPGSAGGDPVTVFPSMLNIAANHPNASTVGLVLRPA
GPAGGGRPDTRLLVGATYTGFGSPFFPRNQSLEDHRFENTPEIAIRALNARGDLAKLFTF
DLNPSDDNIFKIKQGAKARHKLSFVRAFLHPAPPPRGPAAAAYAYLALNSEANAGDKESR
SHSLLARICLAEPGRSANASAGETKKLTESYIQVGLQCGGGGGDDFTRLVSVFPAAAPLR
LGPPAAPPPQELLFGVFERAAPPGARQHSALCAFRFADIERGIRRARNSCFVEPDSGLVT
VLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAILQPIKATPMFIYQGLTSVAVSS
VNNYTVVFLGTANGRLLKINLNSDMKIISRKSVSVAYGESVHPIMQFDPSDSSYLYLMTS
YQMTRVKVAACDQYATCTECLAAADAYCGWCTMETRCSLQHECVNSTEPNFWTSASEGVQ
QCPSMTIMPSEINIDSDNKAMIIQINGNIPSLSGMEMSCDYGNNIYTVAKVPGNDVNYFI
YCNFLPREKYPAFPPNQDHVIVQTAIRVNGKNIVWANFTIYDCKRTGNIYPKTACTSCLS
TKWKCYWCTEKYMCVSNYSDCEDSLKMNGTTDCPRIVPASLEPMPTGASQDIMISLANAA
FSKDTVLECHFGTDRTFEARWVNTSTVQCSSVLLHTSEKSHIFPVNLQLKDKPDRFIDSP
QMMTVEVYNCATGSADCSQCLGREDLGHRCIWSESSSLCRLNTESPQIPVMCPAPEIRKI
EPLSGPLEGGTLLTIRGRNLGRRFSDVVNAVKIGSVRCAPLWDRYMVSEAVVCRTGEAPS
IFSDVVTVNVSREGKSRERYSYVLPEVQSVAPSAGPKAGGTKVTISGSNLSVGSDLRVLV
NSTKQCTDLTRTATTITCTMPAVELTMAVRVCVQFENKSCINDNITFKYERNPIITDINP
KRSQISGGRIITLGGHGFLMVQNVSMVVHSIGKEQTNCKVHTDTMITCPSPAASNLTVGS
KPALVDFYINGRLYMDDRLAPDEDMYPEEAQHTSKFGLEYYANPQFFTAKKEKWIKHHPG
EPLTLVIHKEPDNLSLESDEYQVKIGLISCEIQIVSDKVIHCSVNESLSTSERQLPVTIQ
VGKFNQTIAMLHLGGGETAIIVSIVICSILLLLSVVGLFVFCTKSRRAERYWQKTLLQME
EMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYV
LPYQQLNSQVGCQVQETHPLLSGEWKIPENCRPNMEEGIALFSTLLNNKHFLIVFVHALE
QQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKNPKLMLRRTESVVE
KMLTNWMSICMYSFLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENI
EAKPRNLNVSFQGCGMDSLSVRVMDTDTLSQVKEKILEAFCKNVPYSQWPRVEDVDLEWF
ATSTDSYVLRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLSDKKDTTLSRVKDLDTE
KYFHLVLPTDELIEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILCMRED
KPPVAIKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHI
DACLSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMPPLSEQ
EMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRTQIVNALDSNPTTRRTQLQHKFEQVI
ALMEDNIYECCSEA
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggctccccgggagcgaggcgctaaggggctggcccccctcctgctgctgctcgccctg
ctcggcagccccaacgccggcctggaggtgcagcacaagttcctctcgcccaccttgacc
aacaacttcgccctggatgggctgggcagcaagatctacctggcggctgtcaaccggctc
taccagctctccggccccaacctgacgctggaggtggaggagcaggtgggcccggtgccg
gacaaccccctgtgccacgcgccccagctgccccaggcctcctgcgagcaccccaaggtg
ctgaccaacaactacaacaagatcctgcagccggacccggagcagggcatcgtggtggtg
tgcggctccatctaccagggcttctgccagctgcgcagcatggccaacatctccgccgtg
gccgtgagcttcccgccgggcagtgccggcggcgacccggtgaccgtcttccccagcatg
ctcaacatcgcggccaaccaccccaacgcctccaccgtggggctggtgctgcggcccgcc
gggccggcgggcggggggaggccggacacgcggctgctggtgggggcgacctacacgggc
ttcggcagccccttcttcccgcgcaaccagagcctggaggaccaccgcttcgagaacacg
cccgagatcgccatccgcgccctcaacgcccgcggcgacctggccaagctcttcaccttc
gacctcaacccctccgacgacaacatcttcaagatcaagcagggggccaaggcccgccac
aagctcagcttcgtccgggccttcctgcaccccgccccgccgccgcggggccccgccgcc
gccgcctacgcctacctggccctcaacagcgaggccaacgccggcgacaaggagagccgc
tcgcacagcctgctggcccgcatctgcctggccgagcccggccgcagcgccaacgccagc
gccggcgagaccaagaagctgaccgagtcctacatccaggtggggctgcagtgcgggggc
gggggcggcgacgacttcacccgcctggtctccgtcttcccggccgccgcccccctgcgg
ctgggacccccggcggcgccgccgccccaggagctgctcttcggggtcttcgagagagcc
gccccgccgggggcccgccagcactcggcgctctgcgctttccgcttcgccgacatcgag
cggggcatccggcgggccaggaactcgtgcttcgtggagccggactccgggctggtgacc
gtgctggacagcgtggtgcagggcaccgggccggcctgcgagaagaggaacatccagctg
cagccagagcaattagactgtggagcagcccatctccaacaccctttggccatcctgcaa
cccataaaggcaacaccaatgttcatataccagggcctcacttcggtggccgtttccagt
gtcaataattacactgttgtgtttctgggcacagcaaatggaagactcctgaagattaat
ctgaacagtgacatgaagattattagcaggaagtcagtttcagtggcttatggggaatcc
gttcatcctatcatgcagtttgatccttctgattccagctacctctatctcatgacatcc
tatcagatgacccgtgtgaaggtggctgcctgtgaccagtatgcaacatgtacggagtgc
ttggctgcagctgatgcttattgtggatggtgtacaatggagaccaggtgttctctgcag
catgaatgcgttaattccactgagccaaatttctggacgagtgcaagtgaaggagtgcag
cagtgtccttcaatgacaatcatgccatcagaaattaatattgacagtgacaacaaggcc
atgataatccaaataaatgggaacatcccgagcctcagtggaatggagatgtcttgtgat
tatggaaataatatctacactgtcgccaaagtccccggaaatgatgtaaactattttatt
tattgtaattttcttccaagagagaaatatcccgcgttcccacccaatcaagaccatgtg
attgttcaaactgcaatacgggtcaacggcaaaaatattgtctgggccaatttcaccatt
tatgattgcaaaagaactggaaatatttaccccaaaacagcatgtaccagttgcctctcg
accaaatggaagtgttattggtgcactgagaaatacatgtgtgtctccaattactctgat
tgtgaggactcactaaagatgaatggcaccactgactgtccacggattgtacctgcctca
ctagaacctatgcccactggggcgtctcaggacatcatgatctcactggctaatgctgct
ttctccaaggatactgttttggaatgtcattttggaactgacaggacgtttgaagccaga
tgggtgaacacctccaccgttcagtgcagcagtgtcctgctccacacatcagaaaaaagc
catatcttcccggtaaaccttcagctgaaggataagccagacagattcattgacagtcca
cagatgatgacagtggaggtctataactgtgcaactggaagcgcagactgttctcagtgc
ctggggagagaggacctggggcaccgatgcatctggagtgagagcagctccctttgcaga
ctaaacacagaatccccacagatcccagtcatgtgtcctgctccagagattaggaagatt
gagcccctgagtgggcccctggaaggaggaactctgctcacaataagaggaaggaacctg
ggccgtaggttcagtgatgtcgttaatgctgtcaagatagggagtgtgagatgtgcacca
ctctgggacagatacatggtctctgaggcggttgtatgccggactggagaagctccctct
atattttccgatgtagtgacggttaacgtgagcagggaagggaaatcaagggagcgatac
tcttatgtgctccctgaggtgcagtccgtggctccaagtgctggccctaaagctggaggc
accaaagtaaccatcagcgggagtaatctcagtgtaggatctgatctccgtgtcctggtc
aatagcactaaacagtgcacagacctcactcgaactgctaccaccatcacatgcaccatg
ccggccgtggagctcactatggctgtgcgagtctgtgtccagtttgagaacaagtcttgc
atcaatgataacatcacattcaagtatgagagaaacccgattataacagatatcaacccg
aaaaggagtcagatcagtggaggcaggatcatcactctgggaggacatggctttttgatg
gttcagaatgtgtcgatggtggttcacagcatcgggaaagaacaaacaaactgtaaggtt
cacaccgacactatgattacctgcccctctccagctgcctccaacctcactgtggggagc
aagccagcactggtggacttctacatcaatggacgcctctacatggacgacaggctggct
cccgatgaggacatgtaccctgaggaggcccagcacaccagcaagttcggcctggagtac
tacgccaacccccagttcttcacagccaagaaggagaaatggatcaagcaccatcctggg
gaacccctgactctggttatacataaagagcctgacaacctgagcctggaaagcgatgag
taccaagtgaaaattggcctcatttcctgtgagatacagattgtttcagacaaagtcatt
cactgctcagtcaacgagtcactgagcacatcggaaagacagctgcccgtgacgatccag
gttggaaaattcaaccagacgattgctatgctgcaccttgggggaggcgagacagcgatc
atagtctccatagtcatctgcagtatcctgctgctgctgtctgtcgtaggcctgtttgtg
ttctgcactaagagccgcagggcagagcgctactggcagaaaaccttgctccagatggag
gagatggagtcccagatccgagaggaaatccgcaaaggttttgctgaacttcagactgac
atgacagacctgaccaaggagttaaaccgcagccaggggatcccgttcctggagtacaag
cactttgtgacacggacattcttccccaaatgttcctcgctctatgaggagcgttacgtt
ctgccttaccagcagctcaactcacaggtcgggtgtcaggtccaagaaacgcatcccttg
ctgtcgggagaatggaaaattcctgaaaattgcaggcccaacatggaagaaggaattgcg
ttattctccaccctgctcaacaacaagcacttcctcatcgtattcgtccatgctctcgag
caacagaaggactttgctgttagagacaggtgtaacttggcctccttgctcactattgca
ttacatggaaaactggagtactacactagcatcatgaaggacctgttggtggatctcata
gatgcctcagcttccaaaaaccctaagcttatgctgaggaggaccgagtctgtggtggaa
aagatgctcaccaattggatgtccatctgcatgtacagctttctcagagagacagttggg
gagcccttcttcctgttgctctgtgctatcaaacagcagatcaacaagggttccattgat
gccatcacgggaaaagccaggtatactctcaatgaagaatggctgctgagagagaacatt
gaggcaaagccaaggaacctcaatgtgtctttccaaggctgcggcatggactccctgagt
gttcgagtcatggacacagatactctaagtcaagttaaagagaagatccttgaagctttt
tgcaagaatgtcccatactcccagtggccaagagtagaagatgttgaccttgaatggttt
gccacaagcactgacagctacgtcctgcgggaccttgatgacacttcagtggtggaggac
ggcagaaagaaactcaacactttagcccactacaagattcctgaaggtgcctctctggca
atgagtttatcagataagaaggacaccacgctaagtcgagtgaaggatttggataccgaa
aaatactttcatttagttcttccaactgatgaactgattgaacataagaagtcccataga
cagagccatagaaaaaaagtcctacctgagatctacttgaccaggttgctatctacaaag
ggcacgttgcagaagttcctggatgacctattcaaagccattctctgtatgcgagaggac
aagccgcctgtggctatcaagtatttctttgacttcctggaggagcaagcggagaaaaga
gggatctctgaccctgacactttgcacatttggaaaaccaacagcctacctctgaggttt
tgggtcaacattctgaagaatccccagtttgtctttgacatcgacaagactgaccatata
gacgcctgtctctctgtcatagcccaggccttcatcgatgcctgttccatctccgaccta
cagctgggcaaggactcacctaccaataaactactgtatgccaaggagattccagagtat
aggaaaatagtgcagcgctattacaaacagatccacgacatgccacctctcagtgagcag
gaaatgaatgcacacctcgcagaggagtcacggaaatatcggaatgagtttaacaccaac
gtggccatggctgaaatatataaatatgccaaaagataccgcactcagatagtgaatgcc
ctggactccaaccccaccacgagacgcacacagctgcagcacaagtttgagcaagtgatc
gccctcatggaggacaatatttatgagtgctgcagtgaggcctag
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