Caretta caretta (Loggerhead turtle): 125640086
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Entry
125640086 CDS
T09292
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
ccay
Caretta caretta (Loggerhead turtle)
Pathway
ccay04060
Cytokine-cytokine receptor interaction
ccay04672
Intestinal immune network for IgA production
ccay04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccay00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125640086 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125640086 (CXCL12)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125640086 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ccay04052
]
125640086 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
ccay00536
]
125640086 (CXCL12)
Cytokines and neuropeptides [BR:
ccay04052
]
Cytokines
Chemokines
125640086 (CXCL12)
Glycosaminoglycan binding proteins [BR:
ccay00536
]
Heparan sulfate / Heparin
Chemokines
125640086 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
125640086
NCBI-ProteinID:
XP_048714149
LinkDB
All DBs
Position
7:complement(59503260..59525773)
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AA seq
112 aa
AA seq
DB search
MDGKALALVTCLLLSLSPSEEKPVSLTYRCPCRFYESNVAKANIKHLKILTTPNCSLQIV
ARLKNNSKQVCIDPKLKWIQEYLEKALNKSSLTPREEGIYITMEGLHASSNL
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaagccctggcgctggtcacttgtctgctgctctctctctccccctcggag
gagaaacccgtcagcctgacctaccgatgcccctgcaggttctacgagagcaacgtggct
aaagccaacatcaagcacctcaaaatcctgaccaccccgaattgctcactgcagattgta
gcaaggctgaagaacaacagtaagcaagtgtgcattgatcccaagttaaagtggattcag
gaatatctggagaaagctttaaacaaatcttcactgacccccagagaagaaggcatatac
atcaccatggaagggctgcatgcatcctccaacctctga
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