KEGG   Caretta caretta (Loggerhead turtle): 125640252
Entry
125640252         CDS       T09292                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
ccay  Caretta caretta (Loggerhead turtle)
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ccay03037]
    125640252 (IFT122)
Cilium and associated proteins [BR:ccay03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   125640252 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WDR55 TPR_IF140-IFT172 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd TPR_GEMI5 Beta-prop_WDR19_1st Beta-prop_Vps41 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st B-prop_COPA_B_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st eIF2A PEP5_VPS11_N TPR_7 TPR_COPA_B WDR90_beta-prop_4th Beta-prop_IFT140_2nd Beta-prop_WDR75_1st CENP-B_dimeris TPR_12 NPR1_interact
Other DBs
NCBI-GeneID: 125640252
NCBI-ProteinID: XP_048714556
LinkDB
Position
7:19065433..19115193
AA seq 1240 aa
MRAALTWRDKAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIERPGGSLSPVS
SICWNPSSRWENFWNHRASEEEEESVHNYLEEIPVLKSSTCSSQGSETEEEEHEEEESPR
DTSSDEHNDILAVADWGQRLSFFQLSGKQIGKDRVLNFDPCCISYFSKGEYILMGGSDKQ
VSLYTKDGVRLGTIGDQSSWVWTCKVKPDSNYVAIGCQDGTISFYQLIFSTVHGLYKDRY
AYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPDKILIYELYSDDSSDMH
YRVKEKIAKKFECNLLVVCSDHIILCQEKRLQCLSFNGVKEREWLMESLIRYIKVIGGPS
GREGLLVGLKNGQILKIFVDNLFAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCLVYDI
HTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNGSKIF
CLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDTDWKELAMEALEGLEFETAK
KAFTRVRDLRYLELISSIEERKKRGESNNELFLADVYAYQGKFHEAAKLYRKSGHESLAL
DMYTDLRMFDYAKDFLGSGDPKDTKMLITKQADWAKNINEPKAAVEMYISAGEHMKAIEI
SGDHGWVDMLIDIARKLDKAEREPLSKCAYYFKRLDNHGYAAETYMKIGDLKALVHLHVE
TQRWEEAFALSEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLEQLTH
NAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKTEMLQKFHHFQHLAELYHVYHSIHRYT
EEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYKLARHAYDKL
QGLQIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFV
FSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRLNKREDKWQEMASDGAQRLRFDDNT
DIIEEDDPFTAKLSFEQGGSEFVPVIVNRAVLRSMSRRDVLIKRWPKPLQWQYFRSLLPD
ASITMCPTCFQMFHSEDYELLVLQHNCCPYCRRRIDESNQ
NT seq 3723 nt   +upstreamnt  +downstreamnt
atgagggctgcactgacctggagggataaggccgaacaatgtatatatgatcttgccttt
aaacctgatggaactcagctgataattgcagcaggaaacagattgctggtgtatgataca
tctgatggaaccttaattcagcccttgaaaggtcacaaggacacagtgtactgtgtggct
tatgctaaagacggcaagcgttttgcatctggctctgctgacaaaagtgtaataatttgg
acttcaaagttagaaggaattctgaaatacacgcataatgattctatacagtgtgtttca
tacaatcctgttactcaccaactggcatcctgctcctccagtgattttggcttgtggtct
cctgagcagaagtcagtctccaaacataaatcaagcagtaaaatcacctgctgtagctgg
acaaatgatggccaatacctcgctttggggatgttcaatggcattgtcagcataaggaat
aaaaatggtgaagagaaagtcaaaatagagcgtccaggcggctctttatctccagtatcg
tcaatttgctggaatccatcaagtaggtgggagaatttctggaatcatagagcaagtgag
gaagaggaggagtcagtccacaactacttagaggaaataccagttttgaagtccagcacg
tgcagtagtcagggtagtgagacagaggaagaagaacatgaggaagaggagagccctagg
gacaccagctcagatgaacacaatgacatcttagctgtagcagactggggtcaaaggctt
tccttttttcagctcagtggcaaacagattgggaaggacagggtgctgaattttgacccc
tgctgtattagctatttttccaaaggagaatatatattaatgggaggctcagataagcaa
gtatctctctacacgaaggatggagtgcgtctcggtaccataggggatcagagcagctgg
gtgtggacatgtaaagttaaaccagactccaattatgtggcgatagggtgccaggatgga
acaatttccttttatcagctgattttcagtacagtccatggactctataaagatcgttat
gcttacagggacagcatgactgatgttattgtccagcacctaattactgagcaaaaagtt
agaataaaatgcagagagcttgtaaagaaaattgcaatctacaaaaacagattagcaatc
cagctgccagacaaaatcctgatttatgaattatattcagatgactcctcagacatgcat
taccgtgtgaaggaaaagattgcaaagaaatttgaatgcaacttgctggttgtatgttca
gatcacattatcttatgccaggagaaaagactacagtgcctctcatttaatggtgttaaa
gagcgtgagtggctgatggagtctctcattcgttacattaaagtaattggaggcccttca
ggaagagaaggcctcttagtaggtctgaagaatggccagattctgaagatatttgtggac
aatctttttgcaattgtcctgttgaagcaatccacagctgtgcgctgtctggatatgagt
gcatcccgaaacaagttggcagtggtagatgaaaatgacacctgtctagtatatgatatt
cacaccaaagagctgctgttccaggaacccaatgctaatagcgtggcttggaatacacag
tgtgaggatatgctttgcttttccggagggggttacctcaacatcaaagctagtaacttt
cctgtccatcagcaaaaacttcaaggctttgttgtgggatacaatggctccaagattttc
tgtcttcatgttttttctatgtcggctgttgaagttcctcagtctgctcctatgtatcaa
tacctggaacggaaaatgttcaaagaagcctatcagattgcttgtttaggagtaactgac
actgactggaaagagctggctatggaggccttagaaggtctggagtttgaaactgctaaa
aaggcatttaccagagtacgagatcttcggtatctagaactgatcagcagcattgaggag
aggaagaagcgtggagagagtaacaatgagctatttctagcagatgtttatgcctaccag
ggaaaattccatgaggcagctaaactatacagaaaaagtggacatgagagcctcgctctt
gatatgtacactgatttacgcatgtttgattatgcaaaggatttccttgggtccggagat
cccaaagacactaagatgctaattacaaaacaagcagactgggccaagaatatcaatgaa
ccaaaagcagcagtggagatgtacatttctgcaggcgagcacatgaaggccatagaaatc
agtggagaccatggctgggttgatatgctaatcgatatagctcggaaattggataaagct
gagcgcgaacctttgtcaaaatgtgcctactattttaagagacttgacaaccatggttat
gcagcagaaacctacatgaagataggtgacctaaaggccctggtacatctccacgtggaa
actcagcgttgggaagaagcctttgctttgagtgaaaagcatcctgaatttaaagatgat
gtctatgtcccttatgctcagtggttggcagagaatgatagatttgaagaggcccaaaaa
gcattccacaaggctggcagacagagtgaggccgtaaaagtgctggaacagctaactcac
aatgctgtggtagaaagccgatttaatgatgcagcatattattactggatgctctccatg
cagtgtttagatatagcccaagagaacgaacagcagaagactgaaatgttacagaagttt
caccacttccagcacttggcagaactttatcatgtctatcactctattcacagatacact
gaagagcccttcagtttccatttgcctgaaacactcttcaatatttccaggtttttactt
cacagcctaaccaaggagactccgctgggcatctctaaagtcaatacattatttgcacta
gcaaagcagagtaaagctctgggtgcatataaattggcccgtcatgcctatgacaagttg
cagggactgcagatcccagctagatttcaaaaatcaattgagctgggcagcctgacaatt
cgatccaagccattccatgacagtgaagagcttgtgcccttgtgttataggtgctccacc
aacaaccccttgctaaataatctggggaatgtgtgcattaactgcagacagcccttcgtc
ttctctgcttcatcttacgaagtattgcatctggtggagttctatttggaagaagggatc
actgatgaagaagctgtagctcttattgatctggaagcaccaaggttaaataagagagag
gataaatggcaagagatggcaagtgatggagcacagaggctgagatttgatgacaacaca
gacattatcgaagaggatgatccctttacagcaaaattgagttttgagcaaggaggctca
gaatttgttcctgtgatagtgaatcgtgcagttctccggtcaatgagccggagggatgtc
ctgattaaacgctggccaaagccattacagtggcaatacttccggtccttgctaccagac
gcttccattaccatgtgtccaacatgctttcagatgtttcattcagaggattatgagctc
ctggtgctccagcataactgttgtccatactgtcggagaagaattgatgagtcaaaccag
tga

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